Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1278 ATGGCCACACGACCATGTTGCGATCATCACCAACCTCCAGGGCAGACATTACATGGTGCACTAGTAGATATTTCTGAAATTTTCAACAAGTCCAAAGAGGATGGTGCCAATAATGATGCATCGGGAGAGTTGAAGAAACTTGACAGCTTTGGGAAATGGATGGATAAAGAAATTGGTGGGGACTGTGATGATTCCTTGATGGCGTCTGCCTCTCGAAATTATTGGAATACACTTGATACGCAGAATGAAAACAAGGAGATTGGGCTTATTCTGAAGATGAAACAAAGGTTTCAATCATAG 300 0.42 MATRPCCDHHQPPGQTLHGALVDISEIFNKSKEDGANNDASGELKKLDSFGKWMDKEIGGDCDDSLMASASRNYWNTLDTQNENKEIGLILKMKQRFQS* 100
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1278 Vvi-Chr3 18544552 18544851 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1278 44 82 CAMTA Transcription Factor Family AT2G22300 40.909 1.08e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1278 K21596 - vvi:109122327 141.354