Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1270 ATGTGCCTTATGCCAAAAAGGCCTCTGATGCCATCTGAACTGCATTTTACACAGGTGGGAACTCCAATTTGTATTCCTCATAGGGATTTTATTGATATTGGCCACATTGCGTCCATTCAGAAAAACCGGAGTCCAGTTGATATTGCCAGGAAAGGCCAAGAGGTGGCCATTATGATAGTTGGCACGAATCCGGAAGAGAAGCAAAAGATGCATGGCAGACATTTTGGGGATGAAGATGAGCTTGTCAACCGTATTAGCAGAAAGTCGATTGATGTGCATAAAGCTAATTACCAAGTAACTACGACTTATTGA 312 0.4263 MCLMPKRPLMPSELHFTQVGTPICIPHRDFIDIGHIASIQKNRSPVDIARKGQEVAIMIVGTNPEEKQKMHGRHFGDEDELVNRISRKSIDVHKANYQVTTTY* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1270 103 SUPERFAMILY Translation proteins 19 97 IPR009000 -
Vvi3g1270 103 Gene3D Translation factors 15 102 - -
Vvi3g1270 103 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 18 99 IPR015760 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1270 18 98 Eukaryotic Initiation Factors Gene Family AT1G76810 65.432 1.69e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1270 K03243 - vvi:104878966 167.162