Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1183 ATGGCTGGAAAGCTTGTTATCTCTGTAGTGAAGTGGCTGTGCCATCACATATGGTTTTCTGATATAGCAGTGGCTTTGTCCATTGTATTCATCCTCAGTTGTATACTTAACAGACTCACCAACAAAGGTCCCATGTTATGGCCAGTGCTTGGAATCCTTCCTTCTTTGTTCTTCCATATGAACGACATCTATGACTGGGGAACAAGAGCTTTGATCAAAGCTGGGGGAACATTCCACTATAGAGGAATGTTCAAGAATTTCCCCAAAGGTAACTACTACAGAGAGAGGTTCCATGATTTGCTCGGAGGTGGCATTTTCAACGTGGACCATGAATCATGGAAAGAGCAAAGGCGAATTGCAAGCTCTGAGATGCATTCCACTCAGTTTGTGGCGTACTCCTTTCAAACCATTCAAGATTTAGTGAACCAGAAACTGTTGGAACTAACAGATAAGCTGGCCAAGTCCGGAGACTGCATTGATCTGCAAGAAGTGCTTCTACGTTTTACTTTTGATAACATTTGCACTGCAGCTTTTGGCATTGATCCAGGGTGCCTGGCCTTGGAATTACCTGAAGTTTCCTTTGCAAAAGCCTTTGAAGAGGCTACTGAATTAACCTTGTTCAGATTCATGGTGCCACCTTTTATATGGAAGTCCATGAAGTTCTTTGGAGTAGGAACCGAGAAGCGGCTCCAGGAGGCTGTTCGGGTTGTACATGATTTCGCCGAGAAGACGGTGGCAGACAGGAGGATTGAATTGAGCAAGACTGGAAATTTAAACAAGCAGACCGATCTTTTGTCAAGAATCATGGCCATTGGAGAGCATGAAGAAGGTAAAGACAACCATTTCTCCGATAAGTTTCTTAAGGATTTTTGCATAAGTTTCATCCTGGCAGGACGAGACACCAGCTCCGTGGCTCTGGCATGGTTCTTCTGGCTAATAAACAAAAACCCAGAAGTTGAGAACAAAATTCTAGGCGAGATCAATGAAGTTTTAGGTCACAGAGAGTCCAAAACAGCTCTCACCATGGAAGACCTAAAGAAGATGGTATATCTGCAAGCAGCCTTATCCGAAACCCTACGTCTCTACCCTTCAGTTCCAGTAGACTTCAAAGAGGTTGTAGAGGACGATGTGCTCCCAGATGGGACACGAGTGAAGAAGGGCTCTAGGGTTCTCTACTCAATCTTCTCCATGGCTCGAATGGAGTCCATATGGGGCAAAGACTGCATGGAATTCAAGCCAGAGAGGTGGATCAAAGATGGTCAGTTTGTGAGTGAAAATCAGTTCAAGTATCCTGTGTTTAATGCTGGTCCCAGGCTCTGCATAGGGAAAAAGTTTGCATTCACGCAGATGAAAATGGTGGCTGCTTCAATCCTGATGAGGTACACAGTTAAGGTAGTGGAAGGTCACAGTGTTGTTCCAAAAATGACAACTACACTCTACATGAGGAATGGCTTGTTGGTGACTCTTGAGCCTAGGCTGAGCCTTGTTATTAATTAG 1497 0.4442 MAGKLVISVVKWLCHHIWFSDIAVALSIVFILSCILNRLTNKGPMLWPVLGILPSLFFHMNDIYDWGTRALIKAGGTFHYRGMFKNFPKGNYYRERFHDLLGGGIFNVDHESWKEQRRIASSEMHSTQFVAYSFQTIQDLVNQKLLELTDKLAKSGDCIDLQEVLLRFTFDNICTAAFGIDPGCLALELPEVSFAKAFEEATELTLFRFMVPPFIWKSMKFFGVGTEKRLQEAVRVVHDFAEKTVADRRIELSKTGNLNKQTDLLSRIMAIGEHEEGKDNHFSDKFLKDFCISFILAGRDTSSVALAWFFWLINKNPEVENKILGEINEVLGHRESKTALTMEDLKKMVYLQAALSETLRLYPSVPVDFKEVVEDDVLPDGTRVKKGSRVLYSIFSMARMESIWGKDCMEFKPERWIKDGQFVSENQFKYPVFNAGPRLCIGKKFAFTQMKMVAASILMRYTVKVVEGHSVVPKMTTTLYMRNGLLVTLEPRLSLVIN* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1183 498 Pfam Cytochrome P450 85 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1183 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Vvi3g1183 498 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1183 498 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1183 498 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1183 498 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1183 498 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1183 498 PANTHER CYTOCHROME P450 34 485 - -
Vvi3g1183 498 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1183 498 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1183 498 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1183 498 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1183 498 Gene3D Cytochrome P450 40 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1183 498 SUPERFAMILY Cytochrome P450 43 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1183 498 CDD CYP86A 84 485 - -
Vvi3g1183 498 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1183 Vvi-Chr3 16640517 16642082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1183 5 492 Cytochrome P450 AT1G24540 57.225 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1183 - - vvi:100260584 994.571