Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1181 ATGGTTCAAGCAACAATCATGCTCGAGGGCATGATTAAGATTGAATACTTGATGAACGGATGGTGGCATTGGTCATCACTCTCTGCTGTTGCCAAGACTTCTATCATTTCTTCCCTTGCCCTCTACATATACTCTCTGGATGCTGCCATTGCTTATGAGAAGATCTCATTTAATTTGGATGACTGGCAGTCCCTCGCTCAACCAGAAATGACAGTATCTCCCACTCAGCAGATACCACGTGCAGAACAGCCAATTCCTCCATAA 264 0.447 MVQATIMLEGMIKIEYLMNGWWHWSSLSAVAKTSIISSLALYIYSLDAAIAYEKISFNLDDWQSLAQPEMTVSPTQQIPRAEQPIPP* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1181 87 PANTHER OS02G0192300 PROTEIN 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1181 Vvi-Chr3 16574357 16574620 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1181 1 54 C2H2 Transcription Factor Family AT3G01460 64.815 6.73e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1181 K22768 - vvi:100245816 99.7525