Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1158 ATGTCAGAATTCTCAAGCATGCCAAATTTGGAGAGACTAATTCTTAAAGGTTGTGTAAGCTTGATTGATATTCACCCATCTGTTGGAAATATGAAGAAGCTTACTACCTTAAGTTTGAGATTCTGTGATAAGCTTAAGAATCTGCCAGATAGCATTGGAGACTTGGAATCTCTTGAGATTCTTGATCTCTCTTATTGCTCAAAGTTTGAGAAATTTCTGGAGAAGGGAGGGAACATGAAAAGTTTAAAGAAGCTTCGTTTAAGGAATTCTGCTATTAAGGATCTGCCTGATAGCATTGGAGACTTGGAATCTCTTGAGCTTCTTGATCTCTCTAATTGCTCAAAGTTTGAGAAATTTCCGGAAAAGGGAGGGAACATGAAAAGTTTAATGGAGCTTGATTTAAAAAATACTGCTATTAAGGATCTGCCGGATAGCATTGGAGACTTGGAATCTCTTGAGATTCTTAATCTCTCTAACTCAAAGTTTGAGAAATTTTCGGAGAAGGGAAGGAACATGAAAAGTTTAATGGAGCTTGATAGCAATCAGCTTTGCAATCTGCAAAAACTTAATATCAGTCAAAGCAAAATGGCTGGGCAGATTCCGGTGCTTTCTTTAAGTCTAAAAAGAAATAGACGCACACCATTGCACAAGCAAGGAAGATTTATCAGGTCTGCTCTGGCTTTGCCACCTCAACTGGTTGAAATCCACAACAGAGGAGTTGAAATGCTGGAAACTCAGTGCTCGTATTCCAGAAAGTAG 759 0.3834 MSEFSSMPNLERLILKGCVSLIDIHPSVGNMKKLTTLSLRFCDKLKNLPDSIGDLESLEILDLSYCSKFEKFLEKGGNMKSLKKLRLRNSAIKDLPDSIGDLESLELLDLSNCSKFEKFPEKGGNMKSLMELDLKNTAIKDLPDSIGDLESLEILNLSNSKFEKFSEKGRNMKSLMELDSNQLCNLQKLNISQSKMAGQIPVLSLSLKRNRRTPLHKQGRFIRSALALPPQLVEIHNRGVEMLETQCSYSRK* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1158 252 Gene3D Ribonuclease Inhibitor 1 75 IPR032675 -
Vvi3g1158 252 Gene3D Ribonuclease Inhibitor 76 218 IPR032675 -
Vvi3g1158 252 SUPERFAMILY L domain-like 4 202 - -
Vvi3g1158 252 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 78 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1158 Vvi-Chr3 15795993 15796834 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1158 1 161 WRKY Transcription Factor Family AT4G12020 41.758 3.34e-23 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1158 - - vvi:100256601 273.478