Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1148 ATGGTTGTGGAAAGAGTAGAAGTTGTAATACCTACAAAACAACTCAACCTCTCTAACCACCTGCTAGCCGGAAGGCATATCAAAGATGATGAGTCAGTTGATTGTAATGACCAAGGGGTTGAATATTTGGATGCCAAAGTGGACATCCAACTCAATCAACTTCTAAGCAGAAGAAGAGATGCAATAGAGCAGATGAATTCCCTCATTCAGTTTGATTTTGGTGTGGTTGGATCAGTCACAAGTCCGCTAGTAGTAATTCAGACTACCTTATTTGAATGTGGAGGATTAGTCATTGGTATATGCATCTGCCACACCATTGCCGATGGATTCACTATGGTTAAATTCATTACTTCTTGGGCAACTGCAAGCCAAGTAGGGACAAAAGAACTACTTTTGCCATGTTTCAACTTGGCTTCTCTCTTCTCAACAAAAGTTTTACCCATGATCAAGCCCCCGCCTCCACCAAGAGTCTTTGGACTTGATAAGGTTGTCACAAGGCAATTCGTGTTCGATGGGGCTGAAATATCAATCCTGAAAGCCAAATCCAGTCCTGGGTCTTGTGATGTAGGAGTCAAGCCAAAACCTTCACGAGTTGAGATAGTGACAACAACAATCATATGGAAAGCTCTCATCCGGGTAAGTGAAGCAAAATATGGACGGTTGAGGACTTCTCTTGCAGTTCATTCTATGAACTTGCGTGCCAAAATTGTTCCTGCAGTACAACACAATTATTGTGGATACCTCTACAGATTGGTTGCAGCAAGATTTATGGGGGACAGGAGCAAAATGGAGTTGCCTGATTTGGTGGTTTTACTGAGGGATGCAATCTATGTGAATGCACTATGTTGCGAGAATGTGTTCCCCACTGTTGTAAAATCCTTCAATAAGGTAAACGAGGAATCGAAGAAAGAGTATGTAGATGTCCACATGTTTACTAGCTGGTGTAGATTCCCAACTTACGAAGCTGATTTTGGTTGGGAAAAGCCCACTTAG 993 0.422 MVVERVEVVIPTKQLNLSNHLLAGRHIKDDESVDCNDQGVEYLDAKVDIQLNQLLSRRRDAIEQMNSLIQFDFGVVGSVTSPLVVIQTTLFECGGLVIGICICHTIADGFTMVKFITSWATASQVGTKELLLPCFNLASLFSTKVLPMIKPPPPPRVFGLDKVVTRQFVFDGAEISILKAKSSPGSCDVGVKPKPSRVEIVTTTIIWKALIRVSEAKYGRLRTSLAVHSMNLRAKIVPAVQHNYCGYLYRLVAARFMGDRSKMELPDLVVLLRDAIYVNALCCENVFPTVVKSFNKVNEESKKEYVDVHMFTSWCRFPTYEADFGWEKPT* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1148 330 Gene3D - 18 146 IPR023213 -
Vvi3g1148 330 PANTHER F21J9.9 21 330 - -
Vvi3g1148 330 Pfam Transferase family 22 329 - -
Vvi3g1148 330 Gene3D - 161 330 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1148 Vvi-Chr3 15548411 15549403 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1148 22 329 Monolignol Biosynthesis Gene Families AT5G48930 23.952 7.45e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1148 - K13065 vvi:104878941 578.17