Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1145 ATGGAGGTCCAAATCCCATCCAGGAAGTTGAGAAAACCATCGTCTCCAACACCATCCCATCTCCGCACTTGGAAGCTATCCCCAATTGATCAACTTGTACCTCAAGTCAAAGCGGCTTTTGCATTCTACTATCCCGCTCATGGCACCAACAGCAAAGTTGAAAATGTTGAAAGATGCCAACGTTTAGAGAAATCGTTGTCTGAGACCTTGACTCAATTCTACCCACTAGCGGGAACATATATCAAAGATAGTCATTCGGTTGAGTGTAACGACCAAGGAGCCGAATATTTGGAGGCCAAAGTGGATGCCCAACTCACTCAACTTCTAAGCAAAAGAGATGAGATTATAGAGGAGGTGATTCATTTCGCAAGTGGAAAATTCACAAGTCCGCTAATGACAATTCAAACCACCATGTTTGAATGCGGAGGGCTAGTGATTGGAGTACGCATTTCTCACACCCTTGTTGATGGATTCACGGCATCTAAATTTATTAGTACATGGGCAACTGCAAGCAGCGAAGGGATAAATGAAGCAATTTTGCCATGTTTCAATTTTGCTTCTCTTTTGCCTGCAAAAGACTTACCAACGCTCAAGCCCTCGCCTCCCCCAAAGATCCATGGAGCAGAAAAGTTTGTGACCATGAGGTTCGTGTTTGATGGGGCCAACATATCGTCGCTCAAAGCCAAAGCCAAAGCTAATTCTAAGACTAGTACTCCTGGTCCCAGCTTGAAGCATCAAGTTTCACGAGTTGAGGTGGTGACAGCACTCATATGGAGAGCTCTCATTGGGGTAAGTCAAGGAAAACATGGACGCCTGAGGACTTCCCTTGCGGTCCATTCTGCTAACTTGCGTGGGAAAATTGTTCCAGCTTTACCAGACAATTGTTGTGGGAACCTCTATAAACTAGCGGTTGCCAGATTTGTAGTGGACGATAGCAAAATGGAGTTGCCCAGTTTGGCAGATCTGGTAGGCTTAGTAAGTGGCGCAATATGGACAGAAACACTAAGTCAGGAGGATGTGTTCCCGACTGCGATAAAATCCTTTAATGAGGTAAACGAAGAATTGGGTAAAGAGGAGGTAGATGTGCGAATGTTCACTAGCTGGTGCAAGTTCCCTCTGAATGAAGTTGATTTTGGGTGGGGGAAGCCCTGCTGGGTGAGTAGATGTGCTACTCCTTTAGAAATGGTTAGCCTGCAGGACACAGAATGCGGTGATGGAGTTGAAGCGTGGGTGAGCCTCAAAGAACATGACATGCTTCAATTCCAGAGTGATGCAAACCTTACGACCTTTACTTCTTGTGGGCCAGCATGA 1311 0.4577 MEVQIPSRKLRKPSSPTPSHLRTWKLSPIDQLVPQVKAAFAFYYPAHGTNSKVENVERCQRLEKSLSETLTQFYPLAGTYIKDSHSVECNDQGAEYLEAKVDAQLTQLLSKRDEIIEEVIHFASGKFTSPLMTIQTTMFECGGLVIGVRISHTLVDGFTASKFISTWATASSEGINEAILPCFNFASLLPAKDLPTLKPSPPPKIHGAEKFVTMRFVFDGANISSLKAKAKANSKTSTPGPSLKHQVSRVEVVTALIWRALIGVSQGKHGRLRTSLAVHSANLRGKIVPALPDNCCGNLYKLAVARFVVDDSKMELPSLADLVGLVSGAIWTETLSQEDVFPTAIKSFNEVNEELGKEEVDVRMFTSWCKFPLNEVDFGWGKPCWVSRCATPLEMVSLQDTECGDGVEAWVSLKEHDMLQFQSDANLTTFTSCGPA* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1145 436 Gene3D - 1 196 IPR023213 -
Vvi3g1145 436 Gene3D - 208 430 IPR023213 -
Vvi3g1145 436 MobiDBLite consensus disorder prediction 1 20 - -
Vvi3g1145 436 PANTHER F21J9.9 4 431 - -
Vvi3g1145 436 Pfam Transferase family 1 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1145 Vvi-Chr3 15480490 15481800 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1145 1 398 Monolignol Biosynthesis Gene Families AT5G48930 25.527 1.22e-32 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1145 - K13065 vvi:100251354 872.463