Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1144 ATGGAGGTCCAAATCCTATCCAGGAAGTTAATAAAACCATCGTCTCCAACGCCATCCCATCTCCGCACTTGGAAGCTATCCCCAATTGATCAACTCGTACCTCAAGTCAAAGTAGCTTTTGTATTCTACTATCCCACTCATGGCACCAGCAGCAAAGTTGAAAATGTTGAAAGATGCCAACGTTTGGAGAAATCGTTGTCTGAGACCTTGACTCGATTCTACCCACTAGCGGGAACATATATCAAAGATAGTCATTCGGTTGAGTGTAACGACCAAGGAGCCGAATATTTGGAGGCCAAAGTGGATGCCCAACTCACTCAACTTCTAAGCAAGAGAGATGAGATTATAGAGGAGGTGATTCATTTCGTAGGTGGAAAATTCACAAGTCCGCTAATAACAATTCAAACCACCATGCTTGAATGCGGAGGGCTAGTGATTGGAGTACGCATTTCCCACACCCTTGTTGATGGATTCACGACATCTAAATTCATTAGTACATGGGCAACTGCAAGCAGCGAAGGGATAAATGAAGCAATTTTGCCATGTTTCAGTTTGGCTTCTCTCTTGCCTGCAAAAGACTTACCAACACTCAAGTCCCCGCCTCCCCCAAAGATCCATGGAGCAGAAAAGTTTGTGACCATGAGGTTCATGTTTGATGGGGCCAACATATCGTCGCTCAAAGCCAAAGCCAAAGCCAATTCTGAGACTAGTACTCCTGGTCCCGGCTTGAAGCATCAAGTTTCACGAGTTAATGTGGTGACATCACTCATGTGGAGAGCTCTCATGGGACTAGCGGCTGCCAGATTTGTAGCGGACGATAGCAAAATGGAGTTGCCCAGTTTGGCAGATCTGGACACAGAATACGGTGATGGAGTTGAAGCGTGGGTGAGCCTCAAAGAACATGACATGCTTCAATTCTAG 921 0.4582 MEVQILSRKLIKPSSPTPSHLRTWKLSPIDQLVPQVKVAFVFYYPTHGTSSKVENVERCQRLEKSLSETLTRFYPLAGTYIKDSHSVECNDQGAEYLEAKVDAQLTQLLSKRDEIIEEVIHFVGGKFTSPLITIQTTMLECGGLVIGVRISHTLVDGFTTSKFISTWATASSEGINEAILPCFSLASLLPAKDLPTLKSPPPPKIHGAEKFVTMRFMFDGANISSLKAKAKANSETSTPGPGLKHQVSRVNVVTSLMWRALMGLAAARFVADDSKMELPSLADLDTEYGDGVEAWVSLKEHDMLQF* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1144 306 Gene3D - 208 284 IPR023213 -
Vvi3g1144 306 Pfam Transferase family 1 262 - -
Vvi3g1144 306 Gene3D - 1 196 IPR023213 -
Vvi3g1144 306 PANTHER F21J9.9 4 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1144 Vvi-Chr3 15476934 15478198 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1144 1 278 Monolignol Biosynthesis Gene Families AT5G48930 26.667 7.42e-23 96.3