Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1141 ATGGAGAGCTTCGTCCTCTACACTTCATCTTCCTCCTTCTCACCCTCCTCTCGCCTTTCTTTACTCCGCAGATCACCGCCCTCCCTCAAATCTCCCCCCTCCATTTTCCCCTCCTCCGCCTCTCCTCGCCGGCTTTCCAACCTCCGATCACCTCCCTCGCGCCTTCTCCCCCCCCTCGCCCTCTTCAAATCAAAACCGTCCCCAAAACCCCGCACTTTCCTCCACCCAATCCAAGCATCCCCCTCGCCACCCCCACCACCGGTAGAGGAATCCCCTAAGGGCGCCAAACTTATTCCCTTTATAATCTCAATATCCATTGGCTTGATTGTCCGATTTTTGGTGCCGAAACCCGTGCAAGTGTCGATGCAAGCCTGGCAACTTCTGGCCATATTTCTCTCAACAGTCGCCGGACTGGTATTGAATCCATTGCCGGTGGGTGCCTGGGCTTTTCTCGGCCTCACTACCTCAATTCTCACCAATACGCTGTCGTTTTCCACGGCTTTCGGGGCGTTCACCAACGAGGTGATTTGGTTGATCGTGATTTCGTTTTTCTTCGCCCGTGGGTTCGTGAAAACGGGCTTGGGCGATCGAGTTGCCAACTACTTTGTGAAGTGGCTGGGGAAGAGTACTCTGGGGTTGTCATATGGGTTAACTTTCAGTGAGATTCTCATTGCTCCTGCAATGCCCTCCACCACCGCCAGAGCTGGTGGGATTTACTTGCCCATTATCAAGTCCTTGTCGCTTTCCGTTGGGAGTAAACCGGGCGATCCATCTGCCAGGAAACTCGGCGCTTATCTCGTTCAGTCCCAATTTCAGTCTGCTGGTAACTCTAGTGCTCTTTTCCTGACTGCTGCAGCTCAAAACATGCTATGCCTCAAACTAGCTGAGGAAGTTGGGGTCATTGTTTCAAGCCCATGGGTTTCTTGGTTCAGGGCTGCTAGTGTACCAGCACTGGTTTCTCTTCTACTCTCCCCATTTATCTTATATAATCTATATCCTCCTGAGATCAAAGACACACCTGATGCCCCTGCCATGGCTGCTAAAAGGCTGGAGCATATGGGTTCTGTCACAAGAGATGAGTGGGTGATGATTGGCACAATGATTCTTGCAGTATCTTTATGGGTCTTTGGAGAGGCTCTTGGTATAGCAAGTGTTGTTGCTGCCATGCTTGGCTTATCAATATTGCTATTATTGGGAGTTCTTGAATGGGATGATTGTTTAAGTGAAAAGTCAGCGTGGGATACCTTAGCTTGGTTTGCAGTTCTAGTGGGTATGGCAGGCCAATTAACAAACCTTGGTATTGTAACCTGGATGTCAAGTTGTGTGGCAAACCTCCTTCAATCTTTCTCTTTGAGCTGGCCAGCTGCCTTCGGTGTTCTTCAGGCTTCTTACTTCTTCATTCACTACCTATTTGCAAGTCAAACTGGTCATGTAGGTGCATTGTACTCTGCTTTTCTCGCTATGCACGTGGCAGCTGGGGTGCCTGGTGTGCTGGCAGCATTGACTTTAGCTTACAATACCAATCTTTTTGGTGCACTAACACATTACAGCAGTGGTCAGGCTGCTGTCTACTATGGAGCTGGGTACGTGGACCTTCCAGATGTATTCAAAGTAGGCTTTATGATGGCCTTGAGTAATGCTGTGATTTGGGTAGTAGTTGGGTCATTCTGGTGGAAGTTCTTGGGCCTCTATTGA 1695 0.4968 MESFVLYTSSSSFSPSSRLSLLRRSPPSLKSPPSIFPSSASPRRLSNLRSPPSRLLPPLALFKSKPSPKPRTFLHPIQASPSPPPPPVEESPKGAKLIPFIISISIGLIVRFLVPKPVQVSMQAWQLLAIFLSTVAGLVLNPLPVGAWAFLGLTTSILTNTLSFSTAFGAFTNEVIWLIVISFFFARGFVKTGLGDRVANYFVKWLGKSTLGLSYGLTFSEILIAPAMPSTTARAGGIYLPIIKSLSLSVGSKPGDPSARKLGAYLVQSQFQSAGNSSALFLTAAAQNMLCLKLAEEVGVIVSSPWVSWFRAASVPALVSLLLSPFILYNLYPPEIKDTPDAPAMAAKRLEHMGSVTRDEWVMIGTMILAVSLWVFGEALGIASVVAAMLGLSILLLLGVLEWDDCLSEKSAWDTLAWFAVLVGMAGQLTNLGIVTWMSSCVANLLQSFSLSWPAAFGVLQASYFFIHYLFASQTGHVGALYSAFLAMHVAAGVPGVLAALTLAYNTNLFGALTHYSSGQAAVYYGAGYVDLPDVFKVGFMMALSNAVIWVVVGSFWWKFLGLY* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1141 564 MobiDBLite consensus disorder prediction 1 58 - -
Vvi3g1141 564 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 78 564 IPR030676 -
Vvi3g1141 564 NCBIfam DASS family sodium-coupled anion symporter 116 558 IPR001898 GO:0016020|GO:0022857|GO:0055085
Vvi3g1141 564 MobiDBLite consensus disorder prediction 34 48 - -
Vvi3g1141 564 MobiDBLite consensus disorder prediction 1 24 - -
Vvi3g1141 564 Pfam Sodium:sulfate symporter transmembrane region 97 563 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1141 Vvi-Chr3 15345590 15354563 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1141 1 564 Antiporters AT5G64290 72.117 0.0 809
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1141 - - vvi:100257346 983.4