Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1112 ATGGAAGGCAACAGAGCAGTGGAGGCAGAGAGATGGCTGAGCATCGCCGAGAAGCTCCTTGCCGCACGTGACTTGCAGGGCTGCAAAACGTTTGCCATCCGCGCCCGAGAATCTGACCCCAGACAGGTTCGTTTCTCCGACCAGATCCTTGCTGTAGCCGACGCCCTCATCGCCGGCGAGGCCCGGATCAACAACCAGAACGACTGGTACGCCATTCTCCAGCTCTCTCGTCGTACCCAAGACCCCGAACTCGTCGCCACCCAGTACCGGCGTCTCGCTCTGCTCCTGAACCCGGATCAGAATCGCTTGCCCTTCGCTGATCAGGCCTTCAGGCTTGTCGCGGACGCCTGGTCGGTTCTGTCGAACCAGGCGAAGAAGGCTCTGTACGATGACGAACTCAGTCTTTTAAAACTCGATCCGAGCGCCGATTCGGCTCAACCGGGTCGGAGACCAGTGAGGAAGAGCACTAGAAACAAGGGTGGGAGTGGGGAAATGCCGAGTTTCGAGTCAGCTCGGACGCCTCGAACGACTGAGCCGACTCAGTCTCTGGGTCCGTGTTTCTGGACTGCGTGTCCCTACTGCTACAATCTGTATGAGTACCCTAGGGTGTACGAAGAGTGTGTCCTGCGATGCCAGAACTGTCAGAGGGCATTTCACGCCGTGAGGATCCCGTCTCCGCCAGCGGTCGGCGATGGCAAGGATGGATACTTTTGTTGTTGGGGTTTTTTCCCATTAGGGTTTTCTGTGAACCCTCCTGAAAATGCTAAAACGACAGGCGGCTACTCTAATTGGGTGCCGTTTTCTCCAATGTTCGCTTGCCCTTCGCAGTATGAAGGTCACCGGAATGTCCCCGAGCAACCTGAAAAAGTGGTGGTGGCTAGGAATGTGAATGCCCCAAGAACTAAAAGTCCTGTGGCACGGCGGAGCATTGTTATCTATGATGATGATGATGACGATGACGATGAGTTTATTGAGGTTTCGGACCCAAGTGATGACTCGGATGATGAATGGGGTAGTATTAGGAAGAAGAAGAAGGCGAAGAGCGTGAAGGCTAAGGGTTTGGTGGGTAAAGTTGGGAGGAAGTCGCAAGGAGAGAAGATAAAGAAGGAAGATCAGCGTTTTTCGGGGCAGGTTGAGGGGGGAAGTGGTGAGAGCCCACAAGGTTTGTTGGCTGTGGAAGAAGGTGTGGAGGCACCGGGTGTGTCGAAGGTGGATACAAGCACAAAGGTGGGAGGGAATAATGGGAAGAAGCAACCGGAAAAGGGTGTGAAGGAGTTGGGGAAGTTGGATTTGAATGTGGAATTTAGTAATGAGGTGGAAGAGGCGGCAGTGGGAATAAGTGAAGGGAATGGGGAGGAGGATAACATTGAAGGGATTAGTTTTTTTGAGGGTCTTGATGAGTTTCTGAGTAGTCTGCCTATACTTTCTGTTGTGGGCGATGACAAGGTTAAGGCGGCTTAG 1461 0.5339 MEGNRAVEAERWLSIAEKLLAARDLQGCKTFAIRARESDPRQVRFSDQILAVADALIAGEARINNQNDWYAILQLSRRTQDPELVATQYRRLALLLNPDQNRLPFADQAFRLVADAWSVLSNQAKKALYDDELSLLKLDPSADSAQPGRRPVRKSTRNKGGSGEMPSFESARTPRTTEPTQSLGPCFWTACPYCYNLYEYPRVYEECVLRCQNCQRAFHAVRIPSPPAVGDGKDGYFCCWGFFPLGFSVNPPENAKTTGGYSNWVPFSPMFACPSQYEGHRNVPEQPEKVVVARNVNAPRTKSPVARRSIVIYDDDDDDDDEFIEVSDPSDDSDDEWGSIRKKKKAKSVKAKGLVGKVGRKSQGEKIKKEDQRFSGQVEGGSGESPQGLLAVEEGVEAPGVSKVDTSTKVGGNNGKKQPEKGVKELGKLDLNVEFSNEVEEAAVGISEGNGEEDNIEGISFFEGLDEFLSSLPILSVVGDDKVKAA* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1112 486 SUPERFAMILY Chaperone J-domain 63 132 IPR036869 -
Vvi3g1112 486 MobiDBLite consensus disorder prediction 359 375 - -
Vvi3g1112 486 MobiDBLite consensus disorder prediction 359 422 - -
Vvi3g1112 486 SMART dnaj_3 67 125 IPR001623 -
Vvi3g1112 486 CDD PHD_SF 191 238 - -
Vvi3g1112 486 MobiDBLite consensus disorder prediction 140 181 - -
Vvi3g1112 486 CDD DnaJ 68 122 IPR001623 -
Vvi3g1112 486 MobiDBLite consensus disorder prediction 317 343 - -
Vvi3g1112 486 MobiDBLite consensus disorder prediction 317 333 - -
Vvi3g1112 486 Pfam DnaJ domain 68 130 IPR001623 -
Vvi3g1112 486 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Vvi3g1112 486 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Vvi3g1112 486 Gene3D DnaJ domain 57 145 IPR036869 -
Vvi3g1112 486 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1112 Vvi-Chr3 14584094 14585554 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1112 8 486 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 44.177 1.50e-114 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1112 - - vvi:100253681 933.71