Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1084 ATGGCGGAGCACTCAGGGTTCTGGTTTGGGGCGGATGTGGAGATCCTGTTCAGCGGATGGCCTTTAGGTCACGGCCACTTCCACTTCTACTTGGCTCTACTTCTTGTGTTCATGCTATCCATGGTAGCCCAGATGTATGCAATGACTCCCATGAGCACCCCGAAGATTGTTCCTAAGAGCCTCATCAATCACGCCGCCCTACATGGCCTCCGTACTTTGATCGCCTACTTAGTTCTCCTCTGTGTCATTACCTTCAATGTCGGAGTCATAATCACAGTACTCCTTGGACATGTCGCCGGCTACTTAGCTCTCACATTATACATCAAGTATTACTACCCTGTCCCAGTGGCGACTCCCCCTGCTGATGATGCCAAAGCCTGA 381 0.5118 MAEHSGFWFGADVEILFSGWPLGHGHFHFYLALLLVFMLSMVAQMYAMTPMSTPKIVPKSLINHAALHGLRTLIAYLVLLCVITFNVGVIITVLLGHVAGYLALTLYIKYYYPVPVATPPADDAKA* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1084 126 Pfam Ctr copper transporter family 52 103 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vvi3g1084 126 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 4 105 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1084 Vvi-Chr3 13284429 13284809 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1084 7 125 Inorganic Solute Cotransporters AT3G46900 30.645 9.13e-14 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1084 K14686 - vvi:100852789 221.09