Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1083 ATGGCCCAGCACGGAGGGTTCTGGTTTGGTGCGGATGTGGACATCCTGTTCGCTGGATGGCCTTCTGGTCATGGCCACTTCCATTTCTACATGGCCCTAGTCCTCGTGTTCATGCTGTCGATGTGCGCCCAGATGTATGCAATGACTCCCATGACCTCCCCCAAGATGGTTCCTAAGAGTCTCATCCAGCACGCCGCCCTCCATTGCTTTCGTACTTTCATCAACTTCTTGGTCCTCCTCTGTGTCATCACCTTCAACCTTGGAGTCTTAATCACAGTACTCCTGGGCCACGTAGGCGGCTACGTAGCTCTCACAATGTACATCCACTATCACTTCCCGGCCCCCGTCGCTGATGCCCCGGATAACGATGAAAAAGCCTGA 381 0.5407 MAQHGGFWFGADVDILFAGWPSGHGHFHFYMALVLVFMLSMCAQMYAMTPMTSPKMVPKSLIQHAALHCFRTFINFLVLLCVITFNLGVLITVLLGHVGGYVALTMYIHYHFPAPVADAPDNDEKA* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1083 126 Pfam Ctr copper transporter family 49 103 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1083 Vvi-Chr3 13258653 13259033 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1083 7 125 Inorganic Solute Cotransporters AT3G46900 26.446 1.04e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1083 K14686 - vvi:100852758 268.855