Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1077 ATGAATGGTGATACACTCAAATCCAAGTCACTCCTCACCATGGCCAACACTTTGCTTTTCTTTTGGATTTTGAGTTTCTCTTCTATTTATAAACCTCATCACTGCATCACCATTACCAAATTTCCAGAGTTTTGTCGAAGATTTTCCTTCCCAGAAATGGCTTCCTCTGGCGGTCCCATGCCAGTGCTGCCCACCGAGAAGGCAGTGGCACACACAAGCTTCTGGGTCGGGACCAATGTGATGGTCCTGTTCCCTGGATGGCCTGGTAATTACAGCCTCTTGCATTACTACTTGGCTCTACTTCTGGTCTTTGTGCTTGCCCTCCTTACTCCGATTTGTGGAATGTGTTCCATGCCTGCCAACGAACAAATGGCCCCTATGACCCTGCTTCTCTACGCCATGAGGCATGGCCTGCGCAAGTGCCTTTTCTACTTGGTGGTGCTCTCGGTCGTCACCTTCAATGTTGGAGTTTTCCTTGCAGCTATCGCTGGACATGTGATAGGCTACTTTGCCCTCTCCACATGTATGCTCTATCACCATTGCACTACAACTGATACCAAAGTCTGA 567 0.4832 MNGDTLKSKSLLTMANTLLFFWILSFSSIYKPHHCITITKFPEFCRRFSFPEMASSGGPMPVLPTEKAVAHTSFWVGTNVMVLFPGWPGNYSLLHYYLALLLVFVLALLTPICGMCSMPANEQMAPMTLLLYAMRHGLRKCLFYLVVLSVVTFNVGVFLAAIAGHVIGYFALSTCMLYHHCTTTDTKV* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1077 188 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 67 179 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1077 Vvi-Chr3 13183156 13183722 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1077 72 187 Inorganic Solute Cotransporters AT5G59030 39.024 1.65e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1077 K14686 - vvi:104878898 342.428