Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1065 ATGAAGGAAACATTGAGGTTCTTGGATATAAACACGGGTCCTACCATCAGATCTGATGTGACAACCAGTATGTTGTGTCACAAGGAAGAAATATTTGAACCAATACTTCTCTGCATGACCATTGGTACAGAACATACACATATTTTTTGA 150 0.3733 MKETLRFLDINTGPTIRSDVTTSMLCHKEEIFEPILLCMTIGTEHTHIF* 50
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1065 49 SUPERFAMILY ALDH-like 13 45 IPR016161 GO:0016491
Vvi3g1065 49 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 9 48 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1065 Vvi-Chr3 12904331 12904906 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1065 13 39 Aldehyde Dehydrogenase Gene Family AT2G14170 66.667 1.49e-07 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1065 K00140 - bhj:120069613 48.9062