Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1060 ATGAACGACTGGGAAGGATTAGAGCACAGGCTGAAGCAGATATATGAGAGTGTTAAGTCATTGCCAGATGAAGAATCTGAGGTTCCAGCTTTTCAAGTCCATGAACAGGGACGAAGTGAAGAGAATGAGGAGGAAAAAGATCCAGTTAATGTGCTAAAAGCTGTCGGTGAGGGGATCTTCAATTCTGATGGCGAAACGTGGCGGTTCCAGCGTAAGACCGCCGCACTGGAATTCACCACCCGGACTCTGCGCCAAGCCATGGCTCGTAGGGTCACCCGCGCCATTGGGAAGGACCCGCAGACGCTGGCTCCGGGGCTCCCCGAGAACAGTTTCGCTACGGCTTTCGACCGAGCCACGGAAGCCACCCTGCAGCACTTCATTCTGCCTGTCGGATCTATCAGAAAGAATTTCAAGTTTGACTGTGTTTATGAGCCGAGAGATGATCAGGTTGATGTGATTGCAGACGCTTTATTGATGGTGATTTCGGTGTTAAATGGATAG 501 0.509 MNDWEGLEHRLKQIYESVKSLPDEESEVPAFQVHEQGRSEENEEEKDPVNVLKAVGEGIFNSDGETWRFQRKTAALEFTTRTLRQAMARRVTRAIGKDPQTLAPGLPENSFATAFDRATEATLQHFILPVGSIRKNFKFDCVYEPRDDQVDVIADALLMVISVLNG* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1060 166 Gene3D Cytochrome P450 9 155 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1060 166 SUPERFAMILY Cytochrome P450 55 104 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1060 166 PANTHER CYTOCHROME P450 52 94 - -
Vvi3g1060 166 MobiDBLite consensus disorder prediction 21 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1060 Vvi-Chr3 12810908 12811408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1060 55 129 Cytochrome P450 AT2G45970 55.357 6.14e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1060 K15398 K20544 vvi:100247907 127.102