Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1059 ATGAAAAGCCTTGGGAAGGATATAAAAGCTTTGTGGATTCATCAAGGGGAGGAACGACAACAAAAGAGGAAGGGGGACGGTCTTGCGAAAGAGCTTGACAGGAGGATTCTAGCCTTCCAGAAGGCAGAGAACAGAGTCCTAGAGTTCAAGCTTTCAGAACATAAATCTGAGCCAATCGCGCAGCTAGAGATGGGTATATACCTGAGCACCCCAAAAACTGAGAAGTTATCTGAGGATGGTGAGAATGGCAGGGTTAGATATGGTTCATCATCCATGCAAGGATGGCGCGCAACCATGGAAGATGCTCATGCTGCATACCCTGATCTGGATGCTTCCACTTCGTTTTTTTGGTGTTTGTGA 360 0.4667 MKSLGKDIKALWIHQGEERQQKRKGDGLAKELDRRILAFQKAENRVLEFKLSEHKSEPIAQLEMGIYLSTPKTEKLSEDGENGRVRYGSSSMQGWRATMEDAHAAYPDLDASTSFFWCL* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1059 119 Gene3D - 63 118 IPR036457 -
Vvi3g1059 119 SUPERFAMILY PP2C-like 66 115 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1059 Vvi-Chr3 12802265 12802624 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1059 64 116 PP2C-type Phosphatase Gene Family AT2G25070 79.245 2.93e-23 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1059 K17499 - vvi:100261065 109.768