Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1054 ATGGAAGCCATTGTTGAGCAGCCACCGCCTTGTGCATCTACTAATCAATTTTCTGCAGAATTCTGCTCTTTCATTTCTGCATGCATACAGAAAGACCCAAATGACAGAAAGTCAGCGCATGAACTTATGGCACATCCTTTTATCAGCATGTACAGAGACTTGAATGTTGATCTTGCAACATACTTCACCAATGCAGGATCTCCACTCGCTACATTTTAA 219 0.4155 MEAIVEQPPPCASTNQFSAEFCSFISACIQKDPNDRKSAHELMAHPFISMYRDLNVDLATYFTNAGSPLATF* 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1054 72 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 1 65 - -
Vvi3g1054 72 SUPERFAMILY Protein kinase-like (PK-like) 6 57 IPR011009 -
Vvi3g1054 72 Gene3D Transferase(Phosphotransferase) domain 1 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1054 Vvi-Chr3 12623056 12623939 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1054 1 70 MAP Kinase Kinase Gene Family AT4G26070 61.644 1.83e-27 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1054 K20603 - vvi:100247508 150.984