Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1051 ATGGAGGCTTTTACAGTTAAGGTGTTCATATCTCTAGCTTTGGCGGGTGTTCTTGGACTGTTCTTTCGCCTGTATAATGCCCTGGTGGTTAAGCCGGAGAAGCTGAGATCTATTCTGAGGAGCCAAGGGATCAGTGGCCCGCCACCGTCTTTTCTGCTCGGCAACATAAGGGAGATCAAGAAGTCACGGTCCACGGCAGTGAAGGACTCCTCCACCGACACCCACAACTGTGCTGCTGCTCTATTCCCCTTTTTCGAGCAGTGGCGAAACAAATATGGTCAAGTGTTCATGTTTTCACTTGGTAACACACAAATATTACATGCGAATCAACCTGATATTGTTAGAGAAATTACTACATGCTCATCCTTGGACTTTGGGAAGCCCTCATACCTACAGAGAGAGTTCGGTCCTTTGCTCGGCCAGGGCATTCTAACCTCGAATGGAGCTGTCTGGGCTCATAATAGAAAAATCCTTGCTCCTGAATTGTACATGGAGAAGGTCAAGGGAATGATAGGCCTAATTACTGAGTCCGTAGACACACTGTTGAACTCATGGAGGAGTAAGATCGAGGCAGAGGGTGGAATTGCAGACATAAGAATCGACGAGCACATGAAAAGCTTCTCAGGAGATGTGATCTCAAGGGCTTGTTTTGGTGGCAGTTACACAAAAGGGGAAGAGATTTTCTTGAAGCTTAAAGCTCTCCAAGAGGCCATGTCCAAGAAAGCTTTTTCGTTTATTCCCGGAATGCGATATATTCCTATCAAGCGCAACAGAGATGCTTGGGCACTACAAAAGGATGTCCGGAATTTGATTCTAAAGGTAGTGAGTGAGAGAAAGGAGTTAGCTGCCCATGAAAAAGACCTGCTGCAGATGGTCCTTGAGGGAGCTAAGAAAAGCGAACTAAGCCAAGAAGCAACAGACAACTTCATTGTCGATAACTGCAAGAACATCTACTTGGCTGGCTATGAGACCACTGCGGTGTCCGCTGTATGGTGCCTCATGCTCCTGGCTGCAAATCCTGATTGGCAGGCTCGGGTTCGGGAAGAAGTAGTCGAAATCTGTAAGGGCAGAACACCAGATGCGGATATGATCCGCAAAATGAAACAGATGACGATGGTGATCTACGAATCACTGCGACTCTACCCGCCAGTACCGGTGATGTCGAGGGAGGCCTTAGCGGACATGAAATTCGGAGGCATCCATGTGCCAAAGGGGGTGAATGTATGGAACCTGGTGGTGACACTGCACACAGACCCGGAAAATTGGGGACCTGACGCGCTTAAGTTCAACCCTGAGAGGTTCAAAAATGGGATCACAGGTGCCTGCAAGCTCCCACACTTGTACATGCCGTTCGGGGTTGGTCCAAGGGTGTGCCTTGGCCAGAATTTGGCCATGGTTGAGCTCAAGATACTGATAAGTCTGATACTGTCCAATTTTTCATTCTCCCTTTCTCCTAATTATAAACACTCAGCTGCACTCAGGCTGTTGATAGAACCTGAGAATGGAGTCAATCTCTTGGTAAAGAAGTTGTGA 1533 0.4775 MEAFTVKVFISLALAGVLGLFFRLYNALVVKPEKLRSILRSQGISGPPPSFLLGNIREIKKSRSTAVKDSSTDTHNCAAALFPFFEQWRNKYGQVFMFSLGNTQILHANQPDIVREITTCSSLDFGKPSYLQREFGPLLGQGILTSNGAVWAHNRKILAPELYMEKVKGMIGLITESVDTLLNSWRSKIEAEGGIADIRIDEHMKSFSGDVISRACFGGSYTKGEEIFLKLKALQEAMSKKAFSFIPGMRYIPIKRNRDAWALQKDVRNLILKVVSERKELAAHEKDLLQMVLEGAKKSELSQEATDNFIVDNCKNIYLAGYETTAVSAVWCLMLLAANPDWQARVREEVVEICKGRTPDADMIRKMKQMTMVIYESLRLYPPVPVMSREALADMKFGGIHVPKGVNVWNLVVTLHTDPENWGPDALKFNPERFKNGITGACKLPHLYMPFGVGPRVCLGQNLAMVELKILISLILSNFSFSLSPNYKHSAALRLLIEPENGVNLLVKKL* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1051 510 Pfam Cytochrome P450 81 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1051 510 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1051 510 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1051 510 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1051 510 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1051 510 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1051 510 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1051 510 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1051 510 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1051 510 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1051 510 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1051 510 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1051 510 PANTHER CYTOCHROME P450 FAMILY MEMBER 24 502 - -
Vvi3g1051 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Vvi3g1051 510 Gene3D Cytochrome P450 30 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g1051 510 SUPERFAMILY Cytochrome P450 76 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1051 Vvi-Chr3 12545453 12547474 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1051 113 507 Cytochrome P450 AT5G24900 45.946 1.87e-134 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1051 K24544 - vvi:100255590 1001.5