Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1033 ATGTTGATGAATGGAAGAATTGTTGCAGTTAAAAAGCTAAAGATAGTGGTAGATGGGAAACTTGAACAATTCATTAATGGGGTTGTTATTCTATCCCAAATTAATCATAGAAATGTGGTTAAGCTTTTAGGATGTTCTTTGGAGATAAAAGTACCTTTGTTGATCTATGAGTTTATTTCTAATGGACCCTTTCTGAACATATCCATGGCCAAAATGAAGAGTTCCCGATTACATAGGAAATACATCTTCGAATTGCTACTGAAATACTTAAACCCAAAGTACTTACAATCAAGCCAATTTACTGAAAAGAGTGATGTTTACAATTTTGGAATAGTTCTTATTAGGCTTTTAATTGGGAAAAAAACCAATCTTGTCAACTAG 381 0.3228 MLMNGRIVAVKKLKIVVDGKLEQFINGVVILSQINHRNVVKLLGCSLEIKVPLLIYEFISNGPFLNISMAKMKSSRLHRKYIFELLLKYLNPKYLQSSQFTEKSDVYNFGIVLIRLLIGKKTNLVN* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1033 126 Gene3D Transferase(Phosphotransferase) domain 1 64 124 - -
Vvi3g1033 126 ProSiteProfiles Protein kinase domain profile. 1 126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi3g1033 126 FunFam Wall-associated receptor kinase-like 10 1 58 - -
Vvi3g1033 126 Gene3D Phosphorylase Kinase; domain 1 1 58 - -
Vvi3g1033 126 Pfam Protein tyrosine and serine/threonine kinase 6 67 IPR001245 GO:0004672|GO:0006468
Vvi3g1033 126 SUPERFAMILY Protein kinase-like (PK-like) 5 121 IPR011009 -
Vvi3g1033 126 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 63 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1033 Vvi-Chr3 11939928 11940490 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1033 1 62 Receptor kinase-like Gene Family AT1G69730 75.806 9.60e-26 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Vvi3g1033 PK_Tyr_Ser-Thr 1e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1033 - - cit:102629084 122.479