Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1032 ATGAAAGGCAATGCTAGCAAGGAATCTGATGTCTACAGTTTTGGAGTTGTTGCTTTGGAAATTTTCTATGGAACAGATGAGAAAGGAGATGAAAACAGAGGGAAACAGAGAGAGAGATTAGAGGAGAAATGTTAA 135 0.3778 MKGNASKESDVYSFGVVALEIFYGTDEKGDENRGKQRERLEEKC* 45
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1032 44 Gene3D Transferase(Phosphotransferase) domain 1 1 44 - -
Vvi3g1032 44 SUPERFAMILY Protein kinase-like (PK-like) 3 27 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1032 Vvi-Chr3 11928905 11929039 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1032 1 43 Receptor kinase-like Gene Family AT5G65600 46.939 8.50e-07 41.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vvi3g1032 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1032 - - vvi:100241899 46.2098