Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1021 ATGGATCAAGCTCAGTTTCTTCTGGTAGGGTTACCTCTGTTTCTCTTCTTCTCAGACATCATAAATCTCTTCACGCCATTGCCTCCAAAGCCACCGCCGCATCATCACCATCATCGTCATCACCACCAGCAACCCCAACCCAAACCCCAATCGGCTCCTCTAGATTTCCCCACACAGAAAGAGAGTGGTATTGGAGGTATTGGCTTCGACAACACCGTCAATATTAATTTATGTTCCTCTTGTTCCTACAGCCACCACGAGGAAACATGGCATGAGGCTGCAAGAGAAATACGGGCCCTTAAAGAAGCTAAGAACAAGCTACAAAAGCGGGTGGAGGAATTTACATGGAGATTGCAGTTGGAGAAGCGATTAAGGGATTCAAGTCTTGCCCTTTCTTCTCCACGGGAACCTCAATCTGAGGAAAAGCCCCAGAAATCTCTCATTGAAAAGCAGCAGCAAAACCAAGACCTGCTAATCAAGTTTATTTCACAAGATCTAGGATTCTCTGGGGGCAGGCCTATTGTTGCTTGCCTGATTTACAGATCCCTTCTCCAATGGAGGTCATTTGAGGTTGAAAGAACCAGTGTATTTGATCATATCATTCAGAAAATAGGTGCAGCAATAGAGGGGCTTCTTGCATCTCCACCACAAAGTGCTGGGTTCTCATTTCTTAATGGTCGGGTGCTTGGTGGACTGGATGACTTGAGACAAGTTGAAGCCAAATATGCAGCTTTTCTTTTTAAACAGCAACTCACAACCTTCCTTTAG 768 0.4531 MDQAQFLLVGLPLFLFFSDIINLFTPLPPKPPPHHHHHRHHHQQPQPKPQSAPLDFPTQKESGIGGIGFDNTVNINLCSSCSYSHHEETWHEAAREIRALKEAKNKLQKRVEEFTWRLQLEKRLRDSSLALSSPREPQSEEKPQKSLIEKQQQNQDLLIKFISQDLGFSGGRPIVACLIYRSLLQWRSFEVERTSVFDHIIQKIGAAIEGLLASPPQSAGFSFLNGRVLGGLDDLRQVEAKYAAFLFKQQLTTFL* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1021 255 MobiDBLite consensus disorder prediction 128 147 - -
Vvi3g1021 255 Coils Coil 90 117 - -
Vvi3g1021 255 MobiDBLite consensus disorder prediction 28 63 - -
Vvi3g1021 255 PANTHER SELENOPROTEIN T 1 253 IPR019389 -
Vvi3g1021 255 MobiDBLite consensus disorder prediction 31 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1021 Vvi-Chr3 11795587 11801406 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1021 126 255 Myosins gene family AT5G20490 50.000 2.75e-43 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1021 K10357 - vvi:100266890 199.904