Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0971 ATGCATTCCATGTTGCTTTCACCTAAGAGGAGTTTGAACAAATCAATTGGAATGACCCATTTTCGCAACCAATCAACTTTGTATCGTTTCATTATACAGGCACCTAGACCATCTCGGGCAAGTTTAGTGAAGGGACGTTCTCAAGCTAATGTTGTTGCACAACAAGCGTTGATTGCTCATTGGCAAAGCATTGTGAAAAGCCTGAATTATTACTTGAAGATAATGAAAGCAAACCATGTTCCGCCATTCCTAGTCCGCAAGGTGTTCACTTATTCAACAGGTAAGCATGAATGTTGCTCATTCAGCAATGGGGAGTTTGTTAAGATAGGATTGGCTGAGTTAGAAAACTGGTGCCATGAAGCAACCGAAGAGTATGCTGGCTCAGCTAGGGATGAACTAAGGCATATCAGACAAGCAGTTGGGATCCTGGTTTTATATAGGACTCAAACAGGATTCAGCAAGTTAGAGAAAAGAAAGTACTTCTCTCAGTGGTTCAAAATCATCCTACTTCATTGTGGCTATAAGGACACAGCCACTCTCGGGTACTGGAATAGGATGGGGCCATTTCAGGCCTACAGGAAGCACTATGCTCTTGGGGTGTTCCACCTAGGCTGTGACCCTCACGATCTGCCTTTTCTGCCTGCCAAAATTTTGAAGTGTAAGTTTTCCCATTTACAGAGCATGAATTTCAAGACAAGATCAGTACCATCATGA 714 0.4286 MHSMLLSPKRSLNKSIGMTHFRNQSTLYRFIIQAPRPSRASLVKGRSQANVVAQQALIAHWQSIVKSLNYYLKIMKANHVPPFLVRKVFTYSTGKHECCSFSNGEFVKIGLAELENWCHEATEEYAGSARDELRHIRQAVGILVLYRTQTGFSKLEKRKYFSQWFKIILLHCGYKDTATLGYWNRMGPFQAYRKHYALGVFHLGCDPHDLPFLPAKILKCKFSHLQSMNFKTRSVPS* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0971 237 ProSiteProfiles Dilute domain profile. 1 227 IPR002710 -
Vvi3g0971 237 Pfam DIL domain 89 148 IPR002710 -
Vvi3g0971 237 SMART DIL_2 66 178 IPR002710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0971 Vvi-Chr3 10341172 10343355 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0971 25 147 Myosins gene family AT1G54560 62.044 1.41e-47 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0971 K10357 - vvi:100853701 221.861