Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0968 ATGATAAGAGACAATTTAAAGAAATATTTCCCCATTGCACCTAGAACATCCCAGGCAAGTTTAGTGAAGGGACGTTCTCAAGCTAATGCTGTTGCACAGCAAGCGTTGATTGCTCATTGGCAAAGCATTGTGAAAAGCCTGAATTATTACTTGAAGATAATGAAAGCAAACCATGTTCCGCCATTCCTAGTCCGCAAGGTGTTCACTCAGATATTTTCATTCATCAATGTTCAGTTATTCAACAGCAATGGGGAGTTTGTTAAGACAGGATTGGCTGAGTTAGAAAACTGGTGCCATGAAGCAACCGAAGAGTATGCTGGCTCAGCTTGGGGTGAACTGAGGCATATCAGACAAGCAGTTGGATTCCTGGTTTTATATAGGACTCAAACAGGATTCAGCAAGTTAGAGAAAAGAACTGAAAGTACTTCTCTCAGTGGTTCAAAATCATCCTAG 453 0.4106 MIRDNLKKYFPIAPRTSQASLVKGRSQANAVAQQALIAHWQSIVKSLNYYLKIMKANHVPPFLVRKVFTQIFSFINVQLFNSNGEFVKTGLAELENWCHEATEEYAGSAWGELRHIRQAVGFLVLYRTQTGFSKLEKRTESTSLSGSKSS* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0968 150 Pfam DIL domain 67 131 IPR002710 -
Vvi3g0968 150 ProSiteProfiles Dilute domain profile. 1 150 IPR002710 -
Vvi3g0968 150 PANTHER DILUTE DOMAIN-CONTAINING PROTEIN YPR089W 38 136 - -
Vvi3g0968 150 SMART DIL_2 66 149 IPR002710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0968 Vvi-Chr3 10230989 10232465 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0968 1 127 Myosins gene family AT1G54560 66.667 3.74e-58 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0968 K10357 - vvi:100853701 250.366