Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0847 ATGGTTATTCCACATGGGGGCATCGAGCAATGGATAAAATCTCTCAATATTTCCATAGACAGCGATTGGCGACCGTGGTACGTCGACGGCCAAGTTGCAGGGTACACAAGAAAGTACACCAACAATGGTTATCGCTTAACATATTCAACCATAAAGGGAGCTGGCCACTCACCTCCTGAGTACAAGCGCAGGGAATGTTATGAGATGTTCTATAGGTGGATCCATTATTATCCTTTTTAA 240 0.4417 MVIPHGGIEQWIKSLNISIDSDWRPWYVDGQVAGYTRKYTNNGYRLTYSTIKGAGHSPPEYKRRECYEMFYRWIHYYPF* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0847 79 SUPERFAMILY alpha/beta-Hydrolases 1 78 IPR029058 -
Vvi3g0847 79 Gene3D - 1 79 - -
Vvi3g0847 79 Pfam Serine carboxypeptidase 1 75 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0847 Vvi-Chr3 8193838 8194272 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0847 1 79 Calmodulin-binding Proteins AT2G22960 49.367 3.12e-20 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0847 K16296 - egr:104453015 155.606