Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0762 ATGACGAGCGCATCGGAGCTTTTCTCCAGAAGGTCTCGTCTGGGCCGAGCCGCGCCACCCGCTGATTTCGAGGGGCTTGAATTGCCTGATGACCGGAGCTTTCATTACATCTCCAATCGTCGCCGTCACCACCATCGCCATGATCCCGATGGCTGCGACCCTCTCCGGCGGGCTCAGCATTTCAGGCACATCTCCCATCGCGTGTACCGTCCGGATCGTGAACCGGTTCGGCTGGACCAAGCTACCCGTCAGCCCAGTTCTAGCGGCATCAACAGTGTCAGTGCCGATATTTTAAGTGGTATAAGCCACAGGCAGAGATTCACTGGGAGTGACAGGCTTCCTGGAGCTGTGTTGCTTGCAAGGGAAAGACTTCTTGCAAGGTTGAGAGGTGTCCCACTTTCTGGAAACAGGCTCATAGACGTAGGGGACTGGAGCACTGGGTGGTTGACAGGAGGCACTCCCTCTTCTGATTTGAACTCTGAAACAATGCTGCCACCTTTAATGCGAGAACCAAGCAAAAAGAAGCCACCTGGACTCACTCAGGAAGCCCTGGACTCCTTGCACCGAGCGGTGTTCAGCAGAGCAGAAGGTGCAGAAGAAGGGATGCCAAGAGCGTCAAGGGACTGTTCTATATGCCTGGATGGTTACAGGGAAGGAGACAAACTGACATGCTTACCTTGTGGGCATAAGTTCCATTCTGCCTGCCTGGATCCCTGGGTTCGTACTTGTGGGGACTGTCCATACTGTCGCAGTGTTATAGATATAAGCTCGTAA 774 0.5413 MTSASELFSRRSRLGRAAPPADFEGLELPDDRSFHYISNRRRHHHRHDPDGCDPLRRAQHFRHISHRVYRPDREPVRLDQATRQPSSSGINSVSADILSGISHRQRFTGSDRLPGAVLLARERLLARLRGVPLSGNRLIDVGDWSTGWLTGGTPSSDLNSETMLPPLMREPSKKKPPGLTQEALDSLHRAVFSRAEGAEEGMPRASRDCSICLDGYREGDKLTCLPCGHKFHSACLDPWVRTCGDCPYCRSVIDISS* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0762 257 ProSiteProfiles Zinc finger RING-type profile. 209 250 IPR001841 -
Vvi3g0762 257 PANTHER SI:CH211-59O9.10 41 255 - -
Vvi3g0762 257 SUPERFAMILY RING/U-box 208 255 - -
Vvi3g0762 257 Pfam Ring finger domain 208 250 IPR001841 -
Vvi3g0762 257 SMART ring_2 209 249 IPR001841 -
Vvi3g0762 257 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 167 254 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0762 Vvi-Chr3 6851853 6854724 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0762 1 253 C3H Transcription Factor Family AT1G49850 42.642 5.47e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0762 - - vvi:100249808 509.99