Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0761 ATGATGTTGCGTTCGTGCTTATGCAGACCTCTGGAGAGGTGTTTTGGGAGAAGGGGAGGCGATGGACTCATGTGGAACATGGACCTCAAGCCTCACGCCTCTGGGGACTTCTCCATCGCAGTCGTTCAAGCCAATTCTTCTCTTGAGGATCAGGGTCAAGTGTTCACGTCGCCCTCCGCCACCTACGTCGGTGTCTACGACGGCCATGGCGGCCCTGAAGCTTCTCGATTTGTTAATAAACATCTCTTCCCTTATCTCAACAAATTTGCCTTGGAGCAGGGAGGGTTGTCGGCGGATGTGATAAAGAAGGCGTTTAATGCGACGGAGGAGGAGTTTCTACATGTGGTAAAGAGGTCGTTGCCGGCTCGGCCGCAGATTGCATCGGTGGGGTCCTGTTGTTTAGTTGGTGCGATTTCGAATGGTGTACTGTATGTAGCGAATCTAGGGGACTCGAGGGCGGTTCTTGGGCGGAGAGCTTCGGAGGGGAGGAAGAATCCGGTGGTGGCAGAGCGTTTGTCGACGGATCATAATGTTAGTGTTGAGGAAGTAAGGAGGGAGGTTGAGGCGCTTCACCCGGATGATTCGCATGTTGTGGTTTATACGCGTGGTGTTTGGAGAATTAAGGGCATTATACAGGTTTCAAGGTCTATTGGTGATGTTTATTTGAAGAAACCCGAGTTTAACAGGGACCCGATTTTCCAGCAATTTGGAAATCCTGTCCCTTTGAAACGTCCTGTAATGACAGCAGAACCCTCAATCCTAATTAGAAAGCTTCTGCCACAAGACTCATTCCTAATATTTGCGTCAGACGGTCTATGGGAACAACTGAGTGATGAAGCAGCAGTAGAGATTGTCTTCAAAAACCCAAGAGCTGAAAATGGAATGTTTGGGTTTCACTTTTGA 903 0.4928 MMLRSCLCRPLERCFGRRGGDGLMWNMDLKPHASGDFSIAVVQANSSLEDQGQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYLNKFALEQGGLSADVIKKAFNATEEEFLHVVKRSLPARPQIASVGSCCLVGAISNGVLYVANLGDSRAVLGRRASEGRKNPVVAERLSTDHNVSVEEVRREVEALHPDDSHVVVYTRGVWRIKGIIQVSRSIGDVYLKKPEFNRDPIFQQFGNPVPLKRPVMTAEPSILIRKLLPQDSFLIFASDGLWEQLSDEAAVEIVFKNPRAENGMFGFHF* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0761 300 Pfam Protein phosphatase 2C 58 287 IPR001932 -
Vvi3g0761 300 Gene3D - 27 295 IPR036457 -
Vvi3g0761 300 FunFam Probable protein phosphatase 2C 42 27 295 - -
Vvi3g0761 300 PANTHER PROTEIN PHOSPHATASE 35 289 IPR015655 GO:0004722|GO:0006470
Vvi3g0761 300 ProSiteProfiles PPM-type phosphatase domain profile. 36 300 IPR001932 -
Vvi3g0761 300 SMART PP2C_4 30 297 IPR001932 -
Vvi3g0761 300 SUPERFAMILY PP2C-like 43 287 IPR036457 -
Vvi3g0761 300 ProSitePatterns PPM-type phosphatase domain signature. 62 70 IPR000222 GO:0043169
Vvi3g0761 300 CDD PP2Cc 43 293 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0761 Vvi-Chr3 6846825 6849732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0761 21 295 PP2C-type Phosphatase Gene Family AT3G51370 56.890 2.51e-116 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0761 - K01102 vvi:100254953 580.482