Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0737 ATGGCGGATAGTGAGGGGTTCGGTGAAGACCATCTGAGCGGTGGAAGCTTTTCTCAGCTACTCTTCTCGGACGACGTTGTGGGTCTTGATATTGATGAGAGCTTTGCCTATTCTCCTTCTTTTTCTAACGAGAAGCCTCCTAAAATGCTGTGCTTTGGGGGTTATCAGAGTGAAGTGGGGTTTGCTGAACCCACCAAAACTCCTCAGAAATCTGGAGTTACATGCAGTGATTCCTCCTCTGCTTCTTCCACCAATAACACCAACATCAACAAAGCCTCCAAATCTAATAAAAAACGAAATGGGTCAGGCAATATGTCGGTGCCAACCTCGAGCGGCCTCGCCAAAGCTCCGGCGGGAGGTCAGAGAAACTCTAAGAAGACCAAATCGGAGAATCCCACGTCCGGCGGCCATGTCAAGGTAAAGAAGGAGAAACTAGGAGAGAGAATCACAGCATTGCAGCAGCTAGTTTCTCCTTTTGGCAAGACGGATACAGCTTCAGTTCTTCATGAAGCGATGGGTTATATCAGGTTTCTGCAGGACCAGGTTCAGGTGTTGTGTTCTCCATACTTGCAAACCCTGCCTTCATCGGCCCACATGTCTGAGGGCGGAGAAAACGGAGAAGAGAAGTCTAGCAAAGATCTGAGGAGCAGGGGCCTGTGTCTGGTCCCAGTCGAATGCACAGAACACGTGGCTAACAACAATGGTGCTGATTACTGGTCTCCTGCCATGGCCAACACCTCATCCAAGAAGTGA 753 0.4954 MADSEGFGEDHLSGGSFSQLLFSDDVVGLDIDESFAYSPSFSNEKPPKMLCFGGYQSEVGFAEPTKTPQKSGVTCSDSSSASSTNNTNINKASKSNKKRNGSGNMSVPTSSGLAKAPAGGQRNSKKTKSENPTSGGHVKVKKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIRFLQDQVQVLCSPYLQTLPSSAHMSEGGENGEEKSSKDLRSRGLCLVPVECTEHVANNNGADYWSPAMANTSSKK* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0737 250 CDD bHLH_AtbHLH_like 139 185 IPR045239 -
Vvi3g0737 250 FunFam Transcription factor bHLH113 121 192 - -
Vvi3g0737 250 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 139 191 IPR036638 GO:0046983
Vvi3g0737 250 Gene3D - 139 196 IPR036638 GO:0046983
Vvi3g0737 250 MobiDBLite consensus disorder prediction 61 144 - -
Vvi3g0737 250 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 41 229 - -
Vvi3g0737 250 MobiDBLite consensus disorder prediction 62 111 - -
Vvi3g0737 250 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 129 178 IPR011598 GO:0046983
Vvi3g0737 250 SMART finulus 138 184 IPR011598 GO:0046983
Vvi3g0737 250 MobiDBLite consensus disorder prediction 195 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0737 Vvi-Chr3 6507526 6508998 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0737 139 248 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 59.091 4.92e-39 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0737 - - vvi:100249018 449.129