Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0710 ATGGGTAGCCTTGAGACTGAGAAAACGATCATAGGATGGGCAGCTAGAGACCCTTCCGGCGTTCTCTCTCCCTACACCTACACTCTCAGAAACACGGGCCCAGAAGATGTTCTGATCAAGGTCACCTACTGTGGAATTTGCCATACTGATCTTCATCAAATCAAAAATGACCTTGGCATGTCCCACTACCCCATGGTTCCTGGGCATGAGGTGGTAGGTGAAGTGGTGGAGGTGGGATCGGATGTGAGCAAGGTCAGGGTAGGAGACTGCGTGGGAGTGGGGGTGATCGTCGGATGCTGCAGAAGCTGTCGTCCATGCCAATCAGATATCGAGCAATACTGCAGCAAGAAGATCTGGTCCTACAACGATGTCTATACTGATGGCAAACCCACCCAGGGAGGCTTTGCTGAATCCATGATCGTTGATCAAAAGTTTGTGCTGAAAATACCAGATGGGATGGCACCGGAGCAGGCGGCGCCACTACTGTGCGCGGGGGTGACAGTGTACAGCCCACTGAGTCACTTTGGGCTGAAAAAGAGTGGGTTGAGAGGAGGAATACTAGGGCTTGGGGGAGTTGGGCACATGGGTGTGAAGATAGCAAAAGCCATGGGCCACCATGTGACTGTCATCAGCTCTTCTGATCGGAAGAGGGAGGAGGCTATGGACCATCTTGGCGCTGATGATTACTTGGTCAGCTCTGACTCCACTCGGATGCAGGAAGCTGCCGATTCCCTTGACTATATCATTGATACTGTCCCTGTCTTCCACCCTCTTGAGCCATATCTTTCCTTGCTCAAGCTCGACGGCAAGTTGATTCTCATGGGCGTTATCAATACTCCTCTCCAGTTTGTCACCCCCATGGTTATGCTTGGGAGGAAAATCATAACTGGGAGCTTCATAGGAAGCATGAAAGAGACAGAGGAAATGCTGGAATTCTGCAAGGAGAATGGACTAACATCAATGATCGAAATGGTGAAAATGGATTATGTTAACACAGCTTTGGAGAGATTGGAGAAGAACGATGTGAGGTATAGGTTCGTGGTTGATGTCGCTGGAAGCAAGCTTGATCAGTGA 1074 0.5009 MGSLETEKTIIGWAARDPSGVLSPYTYTLRNTGPEDVLIKVTYCGICHTDLHQIKNDLGMSHYPMVPGHEVVGEVVEVGSDVSKVRVGDCVGVGVIVGCCRSCRPCQSDIEQYCSKKIWSYNDVYTDGKPTQGGFAESMIVDQKFVLKIPDGMAPEQAAPLLCAGVTVYSPLSHFGLKKSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDRKREEAMDHLGADDYLVSSDSTRMQEAADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMVMLGRKIITGSFIGSMKETEEMLEFCKENGLTSMIEMVKMDYVNTALERLEKNDVRYRFVVDVAGSKLDQ* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0710 357 SUPERFAMILY GroES-like 16 181 IPR011032 -
Vvi3g0710 357 CDD CAD1 12 349 IPR047109 GO:0016616
Vvi3g0710 357 Gene3D - 13 350 - -
Vvi3g0710 357 FunFam Cinnamyl alcohol dehydrogenase 164 320 - -
Vvi3g0710 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Vvi3g0710 357 Pfam Zinc-binding dehydrogenase 191 313 IPR013149 -
Vvi3g0710 357 Pfam Alcohol dehydrogenase GroES-like domain 35 149 IPR013154 -
Vvi3g0710 357 FunFam Putative cinnamyl alcohol dehydrogenase 6 321 350 - -
Vvi3g0710 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Vvi3g0710 357 PANTHER ALDEHYDE REDUCTASE 7 352 IPR047109 GO:0016616
Vvi3g0710 357 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
Vvi3g0710 357 FunFam probable cinnamyl alcohol dehydrogenase 13 170 - -
Vvi3g0710 357 Gene3D - 164 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0710 Vvi-Chr3 6212478 6213994 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0710 1 355 Monolignol Biosynthesis Gene Families AT3G19450 81.461 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0710 K00083 - vvi:100257308 635.18