Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0697 ATGGCTTCCTTCTCAATCTCCACCAGCCTCTCTCCTTCACACTCACTCTCAAAACGATCACCTCTGTCACCTGCTTACTCTCGTCCTTGGGTCCCATCTCACCCTCGTCTTAACTCCTCTACTTGGAGGTTCAGACCTCCGAAATTGAACGCCCGACTCGAAAACAAGCCCGGAGACCCACCCTCCACCCCGCGAGAGGCCCAATCCTTGTCTGACAAACAGCTTCAGGAACTGACACCATCATCTGGATCATGTGATCCCCTATGTTCTGTTGATGAAACAAGCTCACAAGATTTTGAAGCCACATACCAGCCAAAGACCGATTTGCTGAAAGCTCTTGCAATTCTTGCAGCAGCTACAACAGGGGCAGTTGCAATTAATCAGTCGTGGGTTGCTGCTAATCAGGATGCTGCTATGGCATTGCTATTTGGAGTGGGATATGCTGGAATAATTTTTGAAGAATCTCTAGCCTTTAACAAAAGTGGAGTGGGGTTATTGATGGCTGTGAGCTTATGGGTTATAAGAAGCATTGGGGCACCTTCAACTGATATAGCTGTTTCAGAGCTAACTCATGCATCTGCTGAAGTTAGTGAAATAGTGTTTTTCTTGCTTGGTGCAATGACCATTGTTGAGATTGTTGATGCTCATCAAGGGTTTAAGCTGGTTACTGACAATATAACAACTCGCAAGCCACAAACTCTACTTTGGGTGGTTGGTTTTGTGACTTTTTTCCTCAGTTCGATCCTTGACAACCTGACGACCACCATTATCATGGTTTCCTTATTGAGAAAACTGGTGCCTCCATCAGAATTCCGCAAGTTCCTAGGAGCAGTTGTTGTGATAGCCGCAAATGCTGGTGGTGCTTGGACTCCCATTGGTGATGTTACCACTACTATGCTGTGGATTCATGGTCAGATATCCACATTGCAGACAATGAAGGGTTTGTTTATACCTTCTGCTGTTTCTCTGGCTGTCCCGCTGGCTCTTATGTCCCTCACTAGTGAAGTTAATGGGAAAGGACAGGATTCTCCCAATGTTTTGGCATCTGAACAGATGGCTCCAAGAGGACAGCTTGTTTTCGCTGTTGGAGTTGGAGCTTTGGTGTTTGTTCCAGTGTTCAAGGCTGTGACTGGTTTGCCTCCTTTTATGGGTATTCTGCTTGGGCTTGGAGTTCTTTGGATTCTGACAGATGCCATTCATTATGGTGAATCGGAAAGACAAAGATTGAAAGTTCCACAGGCTTTATCACGCATTGACACTCAAGGAGCCCTTTTCTTCCTTGGAATCCTTTTATCTGTCAGCAGTCTCGAGGCAGCAGGGATTCTCCGGGAATTAGCAAATTACCTTGATGCACATATCCCTAATGTTGAACTTATTGCAAGTTCAATAGGTGTCGTGTCAGCAATTATAGACAATGTTCCACTGGTTGCAGCGACAATGGGAATGTATGACCTTACCTCATACCCCCAAGACTCTGAGTTCTGGCAGCTGATTGCCTATTGTGCTGGTACGGGTGGATCCATGCTAGTTATTGGCTCTGCTGCTGGAGTTGCATTTATGGGGATGGAAAAAGTGGACTTCTTTTGGTACTTAAGGAAGGTGAGTGGGTTTGCCTTTGCAGGCTATGCTGCTGGTATTGCTGCCTACCTAGCACTTCATAACCTCCACATTTCCACAACTCTAGCTCATGTTCCTTTCTTCTCTGGTTCATAA 1713 0.4583 MASFSISTSLSPSHSLSKRSPLSPAYSRPWVPSHPRLNSSTWRFRPPKLNARLENKPGDPPSTPREAQSLSDKQLQELTPSSGSCDPLCSVDETSSQDFEATYQPKTDLLKALAILAAATTGAVAINQSWVAANQDAAMALLFGVGYAGIIFEESLAFNKSGVGLLMAVSLWVIRSIGAPSTDIAVSELTHASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPQTLLWVVGFVTFFLSSILDNLTTTIIMVSLLRKLVPPSEFRKFLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLQTMKGLFIPSAVSLAVPLALMSLTSEVNGKGQDSPNVLASEQMAPRGQLVFAVGVGALVFVPVFKAVTGLPPFMGILLGLGVLWILTDAIHYGESERQRLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILRELANYLDAHIPNVELIASSIGVVSAIIDNVPLVAATMGMYDLTSYPQDSEFWQLIAYCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYLRKVSGFAFAGYAAGIAAYLALHNLHISTTLAHVPFFSGS* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0697 570 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 61 570 IPR045016 GO:0006814|GO:0015297
Vvi3g0697 570 MobiDBLite consensus disorder prediction 1 87 - -
Vvi3g0697 570 Pfam Citrate transporter 148 503 IPR004680 GO:0016020|GO:0055085
Vvi3g0697 570 NCBIfam sodium:proton antiporter NhaD 164 394 - -
Vvi3g0697 570 MobiDBLite consensus disorder prediction 1 22 - -
Vvi3g0697 570 MobiDBLite consensus disorder prediction 62 87 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0697 1 570 Antiporters AT3G19490 78.720 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0697 - - vvi:100265867 1028.85