Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0690 ATGGCAATAAATCAACATCATCAACAAACACCACCACAGCCCCCCAACTCGTCTTCTTTTTTATTGGATGCTCTCTACTGTGAGGAGGAGAGATGGGAGGAGGAAGAAGAAGATGAGTGTTTGCAGGAGGAAGCCTGTGAGAAATATGGCAATGTTGATAATGATGGGATAGACCCTTCATCTACTCTTCTTCCTCTGCTGTTGCTGGAACAGGATTTGTTCTGGGAAGATGAGGAGCTTCTGTCTCTCTTCTCCAAAGAAGAGCAGCAAGCGAGTCTCGGTGCCGGCAATGGTGAAATGGATGGTGCTCTCGCTGTAGCTCGGCGTCAGGCCGTGGAGTGGATGATGAAGGTCAATGCCCATTACGGATTCTCAGCTGTAACTGCGATTCTCGCCATTAACTACTTGGATAGGTTCCTTTCAAGCCTCCATTTTCAGAGAGATAAGCCATGGATGATCCAGCTAGCAGCTGTGACTTGTCTCTCCTTGGCTGCCAAGGTGGAAGAGACCCAAGTGCCTCTCCTCCTAGACCTGCAAGTGGAGGACAGCAAGTATGTGTTTGAAGCGAAAACAATTCAGAGAATGGAGCTTCTGGTGCTCTCAACTCTTCAATGGAAGATGAACCCAGTCACCCCACTCTCCTTCATTGATCACATCATAAGAAGGCTTGGATTGAAGACCCATCTCCACTGGGAGTTTCTCCGCCTATGCGAGCGTTTTCTCCTCTCTGTCGTCGCCGATTCGAGGTTCGTCCGTTACCTTCCTTCTGTATTGGCTACTGCAACAATGCTTCACGTAATAAATCATGTTGAGCCCTGCAATCCTATTGAATACCAAAACCAGCTTCTGGGAATCCTCAAAATCGACAAGGATAAAGTGACTGAATGCCATCAACTCATTGTGGAAGTATCAAACACCCATTTCTATGCTCAAAACAACCCTCACAAGCGCAAGTACACCAAAATTCCTGGCAGCCCAAATGGTGTGATGGATGCATATTTCAGCTGTGATAGCTCAAACGATTCTTGGGCTGTGGAATCATCAGTGTCCTCTTCACCGGTCGACCCTCTCTTCAAGAAAAGCAGAACCCAGGAGCAGCAGATGCGGTTGCCATCACTGAACCGTGTCTTTGTGGATGTCATTGGCAGCAGTCCTCGTTAA 1161 0.478 MAINQHHQQTPPQPPNSSSFLLDALYCEEERWEEEEEDECLQEEACEKYGNVDNDGIDPSSTLLPLLLLEQDLFWEDEELLSLFSKEEQQASLGAGNGEMDGALAVARRQAVEWMMKVNAHYGFSAVTAILAINYLDRFLSSLHFQRDKPWMIQLAAVTCLSLAAKVEETQVPLLLDLQVEDSKYVFEAKTIQRMELLVLSTLQWKMNPVTPLSFIDHIIRRLGLKTHLHWEFLRLCERFLLSVVADSRFVRYLPSVLATATMLHVINHVEPCNPIEYQNQLLGILKIDKDKVTECHQLIVEVSNTHFYAQNNPHKRKYTKIPGSPNGVMDAYFSCDSSNDSWAVESSVSSSPVDPLFKKSRTQEQQMRLPSLNRVFVDVIGSSPR* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0690 386 Gene3D - 106 208 - -
Vvi3g0690 386 PANTHER CYCLINS 82 305 IPR039361 -
Vvi3g0690 386 MobiDBLite consensus disorder prediction 347 366 - -
Vvi3g0690 386 SMART cyclin_7 113 201 IPR013763 -
Vvi3g0690 386 SMART Cyclin_C_2 210 338 IPR004367 -
Vvi3g0690 386 Pfam Cyclin, N-terminal domain 107 208 IPR006671 -
Vvi3g0690 386 SUPERFAMILY Cyclin-like 211 319 IPR036915 -
Vvi3g0690 386 CDD CYCLIN_AtCycD-like_rpt1 107 205 - -
Vvi3g0690 386 CDD CYCLIN_AtCycD-like_rpt2 210 300 - -
Vvi3g0690 386 FunFam D3-type cyclin 101 208 - -
Vvi3g0690 386 SUPERFAMILY Cyclin-like 75 208 IPR036915 -
Vvi3g0690 386 ProSitePatterns Cyclins signature. 108 139 IPR006671 -
Vvi3g0690 386 Pfam Cyclin, C-terminal domain 210 320 IPR004367 -
Vvi3g0690 386 Gene3D - 209 298 - -
Vvi3g0690 386 FunFam CYCLIN D32 209 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0690 Vvi-Chr3 5973962 5975486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0690 1 303 Core Cell Cycle Gene Families AT4G34160 56.250 6.83e-117 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0690 K14505 - vvi:100264093 701.049