Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0662 ATGCTTCACTCCCTCCATATCCCAACCATATCTTCCATCAAAAGCCCTAGTTCTCAATCTCTCTCTTCTTCTGAACACCCTCCTTATCTGCTCAGATTCCGTACATCCCACCGTGAAAATCTCCGGTACCTCAAAACCCTGGGCATCATCGATCCAAGCACCAAACCACACAAATTTCCATCGCCAGAAGCCGTAGATCAGGTCCTTTCCACTGTGAATTTCCTTAAATCTAAGGGATTCTCCGAGCCCGATTTCCCCAGACTCTCCTTCCTCTGCCCAAAACTATTCTCTTCCGACTCCGACCCCACCGACATCGAACCGGTTTTTGATTTCCTAACCTTAGATTTGGCCGCGTCGGATCAAGAATCATGCAGTTTGATTCTCCGGTGCCCTCAGATTCTGCTCTCGGATGTAGAGTACTGTTTGAGGCCAACACTTCTTTATTTAAGAAAATTGGGAGTAGAGAAGCTCAATGTGCCTACTTCGCTTAACGCCCATCTTTTGAACACTCGGGTGGAGAGGCTTGTGGCGAAGATTAGGTTTTTGCGGAGCGTGGGATTATCGTACGAGGAATCCGCTAGGGCTTGTGGGCGGTTTCCGGCCGTTTTTGGTTATAGTATTGAGAATAATTTGAAGCCCAAGTTTAATTATTTGGTGAGGGAGATGAAGAGGAGTGTTGAGGAATTGAAGGTGTTTCCGCAGTACTTCGCATTTAGCTTGGAGAATCGGATAATGCCGAGGCATTTGCATTTGGAGCAGAGGAATGTTCGGATTTCATTGAAGAGAATGCTATTGTGGAGCGATCAAAAGTTTTATGCGAAATGGAAGTGA 831 0.4633 MLHSLHIPTISSIKSPSSQSLSSSEHPPYLLRFRTSHRENLRYLKTLGIIDPSTKPHKFPSPEAVDQVLSTVNFLKSKGFSEPDFPRLSFLCPKLFSSDSDPTDIEPVFDFLTLDLAASDQESCSLILRCPQILLSDVEYCLRPTLLYLRKLGVEKLNVPTSLNAHLLNTRVERLVAKIRFLRSVGLSYEESARACGRFPAVFGYSIENNLKPKFNYLVREMKRSVEELKVFPQYFAFSLENRIMPRHLHLEQRNVRISLKRMLLWSDQKFYAKWK* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0662 276 MobiDBLite consensus disorder prediction 8 25 - -
Vvi3g0662 276 Gene3D Transcription termination factor 3, mitochondrial 35 276 IPR038538 -
Vvi3g0662 276 SMART mt_12 193 225 IPR003690 GO:0003690|GO:0006355
Vvi3g0662 276 SMART mt_12 86 119 IPR003690 GO:0003690|GO:0006355
Vvi3g0662 276 SMART mt_12 226 257 IPR003690 GO:0003690|GO:0006355
Vvi3g0662 276 SMART mt_12 160 188 IPR003690 GO:0003690|GO:0006355
Vvi3g0662 276 SMART mt_12 124 155 IPR003690 GO:0003690|GO:0006355
Vvi3g0662 276 FunFam Transcription termination factor MTEF1, chloroplastic 35 276 - -
Vvi3g0662 276 PANTHER CGI-12 PROTEIN-RELATED 65 274 IPR003690 GO:0003690|GO:0006355
Vvi3g0662 276 MobiDBLite consensus disorder prediction 1 25 - -
Vvi3g0662 276 Pfam mTERF 116 271 IPR003690 GO:0003690|GO:0006355
Vvi3g0662 276 Pfam mTERF 67 157 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vvi3g0662 mTERF 5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0662 K15032 - vvi:100853221 529.635