Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0639 ATGAATTCTTCATGGATTTTCTTCCTCTTGTCTGAAAAATTCTTCTCTCCCTGCCACCTCCACCCCCACGCCAGGAAGAACGAGAAAAATATTTTCTGTTTGGATTGCTGCCTCACTCTCTGCCCCCACTGCCTCCCTCTTCACGACTCTCACCGTTTGCTTCAGGTTCGTAGGTATGTCTACAACGACGTCGTTCGGCTCGATGACATGGAGAAATTGTTCGACTGCAGATTCGTTCAGTCGTACATAACCAACAGTTCGAGAGTGGTTTTCCTAAACCACAGGCCCCAAACACGCCCCATCAAATGCTCCGGCAGCTTCTGCAGTTCCTGCCAGAGAACTCTTCAAGAGCCGTACCAATTCTGCTCTCTAGCTTGCAAGGTACGGCATGCGGTAGACATGGAACGGCCGGTTTCGAGGTACATTTACGACTGCGAGTGCCTGCAGCCGTTGGATTTGGGGTGCGCGAATCTCGAGGAGTCGCAGATGACGCCCAGCTCAGTATTGGACGCTGAGGTCTCGTCTCGCAATACGACGTCGTCTGGCTCCTGCACTGACGGTGACGGTGGCGTTGGGTGCTTAAATGTCGGATGTACGGCCACGACGGAGAAGGTTACGCGGAAGAAACGGTCCACCCGAGTCGCGGTGGCAAATTTTTGTGACCGAATTACCCCTCGCTCCGTTAGCAAGCGCAAAGGCCTCCCTCTTCGTAGCCCACTGTACTAG 726 0.5344 MNSSWIFFLLSEKFFSPCHLHPHARKNEKNIFCLDCCLTLCPHCLPLHDSHRLLQVRRYVYNDVVRLDDMEKLFDCRFVQSYITNSSRVVFLNHRPQTRPIKCSGSFCSSCQRTLQEPYQFCSLACKVRHAVDMERPVSRYIYDCECLQPLDLGCANLEESQMTPSSVLDAEVSSRNTTSSGSCTDGDGGVGCLNVGCTATTEKVTRKKRSTRVAVANFCDRITPRSVSKRKGLPLRSPLY* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0639 241 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 4 240 - -
Vvi3g0639 241 Pfam PLATZ transcription factor 57 128 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0639 Vvi-Chr3 5469647 5470680 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vvi3g0639 PLATZ 2.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0639 - - vvi:100855200 483.796