Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0599 ATGGGGATCAAGAGAGATGAAGCTTGCCATAACCTTGTGTTTCTTGCTGGTTTCAACGCATACGGTGGCATGAAGACCCTGTTTCCTGCTTTGATCAAGTGGGTTGGCTTAGCCGGAGAGAAATTACACGGCCAGTTGGCTGATGAGATCAGGAGCATCGTTAAGGCTGAGGGAGGAGTGACATTTGCGGCGTTGGACAAAATGGCTTTGACTAAATCGGTTGTGTATGAGGCTCTGAGGATTGAGCCTCCGGTTCCATTCCAGTACGGGAAGGCCAAGGAGGATATGGTGATCCACAGCCATGACGCTGCATTTGAGATCAAGAAAGGGGAGATGATATTCGGATATCAGCCATTTGCCACCAAGGATCCCAAGGTTTTCGACAATCCTGAGGAGTTTGTGGCCCATAGGTTCATGGGCGATGGAGAGAAAATGCTCGAGTACGTGTATTGGTCTAATGGACGCGAGTCAGATGATCCAACGGTGGAGAACAAACAGTGTCCGGGAAAGGATCTGGTGGTCCTGCTGTCCAGGGTAATGATGGTGGAGTTTTTCCTCCGTTACGACACGTTCAACATTGAGTGCGGAACCTTGCTGTTGGGATCATCAGTGACGTTCAAGTCGTTGACCAAGCAGCCTACATTTGATCACAAGTCAATTACGCACGTATCGTAG 675 0.4933 MGIKRDEACHNLVFLAGFNAYGGMKTLFPALIKWVGLAGEKLHGQLADEIRSIVKAEGGVTFAALDKMALTKSVVYEALRIEPPVPFQYGKAKEDMVIHSHDAAFEIKKGEMIFGYQPFATKDPKVFDNPEEFVAHRFMGDGEKMLEYVYWSNGRESDDPTVENKQCPGKDLVVLLSRVMMVEFFLRYDTFNIECGTLLLGSSVTFKSLTKQPTFDHKSITHVS* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0599 224 Gene3D Cytochrome P450 1 214 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0599 224 PANTHER CYTOCHROME P450 26 6 188 - -
Vvi3g0599 224 Pfam Cytochrome P450 45 142 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0599 224 PRINTS E-class P450 group IV signature 68 84 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0599 224 PRINTS E-class P450 group IV signature 105 119 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0599 224 PRINTS E-class P450 group IV signature 121 139 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0599 224 PRINTS E-class P450 group IV signature 167 185 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0599 224 SUPERFAMILY Cytochrome P450 42 190 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0599 224 CDD CYP74 1 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0599 Vvi-Chr3 5174535 5175209 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0599 1 211 Cytochrome P450 AT5G42650 60.094 2.44e-91 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0599 K01723 - vvi:100264033 458.373