Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0598 ATGTCCTCTTCTTCTTCCTCTCTTCCCCTCAATTTCGTCAACTCATCTTCATCATCAAAACTTCCACTGCGATCCATCCCGGGTGATTGTGGCTCACCCTTCTTTGGGCCCATTAAGGATCGTTTCGACTACTTCTACAATGAAGGCCGTGACCAGTTCTTCAGAACTCGCATGCAGAAATATCAATCCACGGTCTTCAGAGCCAACATGCCACCCGGCCCTTTCATGGCTTTCAACCCTAATGTCGTTGTCCTCCTCGACGCCATCAGCTTTCCCATCCTTTTCGACACCTCCAGAATTGAAAAGAGAAATGTCCTCGACGGCACATACATGCCCTCCACCGCCTTCACTGGTGGCTACCGTGTCTGTGCATATCTTGACCCTTCCGAGCCCAACCACGCCCTTCTCAAACGCTTTTTCACGTCCTCGCTCGCAGCTCGACACCATAACTTCATTCCTGTGTTTCGTAGCTGCTTAACAGAGCTCTTCACCACCCTCGAAGACGATGTTTCCAGAAAAGGGAAAGCCGATTTCAATGGCATATCTGATAACATGTCTTTCAACTTCGTCTTCAAACTCTTCTGCGATAAGCATCCCTCCGAGACCAAACTCGGATCAAATGGACCCAATCTTGTTACAAAATGGTTGTTCCTCCAACTCGCACCTCTCATCACGCTTGGATTGTCCATGTTACCAAACGTTGTAGAAGATTTACTTCTACACACCTTTCCCTTACCCTCATTATTCGTAAAATCCGATTATAAGAAGCTTTACCATGCTTTTTACGCATCGGCGTCCTCGTTATTGGATGAAGCCGAGAGCATGGGGATCAAGAGAGATGAAGCTTGCCATAACCTTGTGTTTCTTGCTGGTTTCAACGCATACGGTGGCATGAAGACCCTGTTTCCTGCTTTGATCAAGTGGGTTGGCTTAGCCGGAGGGAAATTACACCGCCAGTTGGCTGATGAGATCAGGAGCATCGTTAAGGCTGAGGGAGGAGTGACATTTGCGGCGTTGGACAAAATGGCTTTGACTAAATCGGTTGTGTACGAGGCTCTGAGGATTGAACCTCCGGTTCCATTCCAGTACGGGAAGGCCAAGGAGGATATGGTGATCCACAGCCATGACGCTGCATTTGAGATCAAGAAAGGGGAGATGATATTCGGATATCAGCCATTTGCCACCAAGGATCCCAAGGTTTTCGACAATCCTGAGGAGTTTGTGGCCCACAGGTTCATGGGCGATGGAGAGAAATTGCTCGAGTACGTGTATTGGTCTAATGGACGCGAGTCAGATGATCCAACGGTGGAGAACAAACAGTGTCCGGGAAAGGATCTGGTGGTCCTGCTGTCCAGGGTAATGCTGGTGGAGTTTTTCCTCCATTACGACACGTTCGACATTGAGTGTGGAACCTTGCTGTTGGGATCATCAGTGACGTTCAAGTCGTTGACCAAGCAACCTACATTTGATCACAATTTCTTTCAATTACCAGCAAAATTAGGGCTGAGAATGGAATTCCCAAACCCTAAAACAAAAAGAATTCCCAAATCTGAAAACAGTCTAGGATTCGGTTTTATAAATTACAAAAAGAACAACCATAATAAAGATGAAAAGCAACGAAGGAAGAAAAAGGAAATGAGAGAGGAGAGAGGAGACGCAGAGAGAGCAGCAGTCTCACCTTCTGGTGGGGAACACCAAGGACGAACATGCCAATTCTAA 1719 0.4718 MSSSSSSLPLNFVNSSSSSKLPLRSIPGDCGSPFFGPIKDRFDYFYNEGRDQFFRTRMQKYQSTVFRANMPPGPFMAFNPNVVVLLDAISFPILFDTSRIEKRNVLDGTYMPSTAFTGGYRVCAYLDPSEPNHALLKRFFTSSLAARHHNFIPVFRSCLTELFTTLEDDVSRKGKADFNGISDNMSFNFVFKLFCDKHPSETKLGSNGPNLVTKWLFLQLAPLITLGLSMLPNVVEDLLLHTFPLPSLFVKSDYKKLYHAFYASASSLLDEAESMGIKRDEACHNLVFLAGFNAYGGMKTLFPALIKWVGLAGGKLHRQLADEIRSIVKAEGGVTFAALDKMALTKSVVYEALRIEPPVPFQYGKAKEDMVIHSHDAAFEIKKGEMIFGYQPFATKDPKVFDNPEEFVAHRFMGDGEKLLEYVYWSNGRESDDPTVENKQCPGKDLVVLLSRVMLVEFFLHYDTFDIECGTLLLGSSVTFKSLTKQPTFDHNFFQLPAKLGLRMEFPNPKTKRIPKSENSLGFGFINYKKNNHNKDEKQRRKKKEMREERGDAERAAVSPSGGEHQGRTCQF* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0598 572 MobiDBLite consensus disorder prediction 530 555 - -
Vvi3g0598 572 MobiDBLite consensus disorder prediction 1 21 - -
Vvi3g0598 572 MobiDBLite consensus disorder prediction 529 572 - -
Vvi3g0598 572 Coils Coil 536 556 - -
Vvi3g0598 572 SUPERFAMILY Cytochrome P450 21 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0598 572 PRINTS E-class P450 group IV signature 379 393 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0598 572 PRINTS E-class P450 group IV signature 395 413 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0598 572 PRINTS E-class P450 group IV signature 342 358 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0598 572 PRINTS E-class P450 group IV signature 441 459 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0598 572 Gene3D Cytochrome P450 17 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0598 572 CDD CYP74 55 481 - -
Vvi3g0598 572 Pfam Cytochrome P450 318 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0598 572 PANTHER CYTOCHROME P450 26 20 464 - -
Vvi3g0598 572 FunFam Allene oxide synthase, chloroplastic 21 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0598 Vvi-Chr3 5160926 5164408 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0598 2 485 Cytochrome P450 AT5G42650 54.115 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0598 K01723 - vvi:100526774 954.896