Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0597 ATGTCTTCATCTTCTGATAAAAACGATCTCAATTCATCTTCTTCATTGTCTAAACTTCCATTACGAAAGATTCCAGGCGATTATGGCTTGCCCTTCTTTGGTGCAATAAAGGATCGTCTTGATTACTTCTACAAACAGGGGCGGGAGGAGTTCTTCAACGCTCGAATGCACAAGTATCAATCCACCGTTTTCAGAGCCAACATGCCACCTGGTCCTTTCATGGCTTCCAACCCTAATGTCATCGTCCTCCTCGACTCCATCAGCTTTCCCATCCTATTCGACACCTCCAAAGTTGAAAAGAGAAACGTCCTTGACGGCACATACATGCCCTCCACCGCCTTCACTGGTGGTTATCGAGTCTGTGCATATCTCGACCCTTCCGAAACCAACCACGCTCTTCTCAAGCGCTTGTTCATGTCAGCACTTGCTGCTCGGCATCATAACTTCATTCCCCTGTTTCGTAGCAGCTTGTCCGAGCTCTTCACCAGCCTCGAAGATGATATTTCCAGCAAAGGCGAGGCAGACTTCAATGACATATCTGATAACATGTCTTTCAACTTCGTGTTCAGACTGTTTTGTGATAAATATCCTTCAGAGACTGCGCTCGGTTCACAAGGACCCAGTATTGTTACAAAATGGTTGTTCTTCCAACTTGCACCTCTCATTACACTTGGGTTGTCCTTGTTACCAAACTTTGTAGAAGATCTACTTCTACACACCTTTCCCTTACCGTCAATATTCGTAAAATCCGATTATAAGAAGCTTTACCGCGCCTTTTATGCATCTGCGTCCTCGATATTGGATGAAGCTGAGAGCATGGGAATTAAGAGAGATGAAGCTTGCCATAACCTTGTGTTTCTTGCTGGCTTCAATGCATATGGTGGCATGAAGGCTTTGTTTCCCTCTTTGATCAAGTGGGTTGGCTCAGCAGGAGAGAAGCTACACCGCGAACTCGCTGATGAAATAAGGACCGTTGTTAAAGCGGAGGGAGGAGTGTCTTTTGCAGCTCTTGAGAAGATGAGTTTGACCAAGTCAGTGGTATATGAGGCTCTGAGGATTGATCCTCCGGTTCCATTCCAGTACGGAAAGGCCAAGGAGGATATGGTGATCCACAGCCATGATGCTGCATTTGAGATCAAGAAAGGGGAGATGATATTCGGATATCAGCCATTTGCCACCAAGGATCCTAAAGTTTTCGACAATCCTGAGGAGTTCATGGGCAACAGGTTTATGGGGGAGGGAGAGAGACTGCTCAAGTACGTGTATTGGTCTAATGGACGTGAGTCAGGTAATCCGACGGTGGAAAATAAACAGTGTGCAGGGAAGGATCTGGTGCTGCTGCTCTCCAGGGTAATGCTGGTGGAGTTCTTCCTCCGCTATGACACGTTCGACATTGAATCCGGAACCTTGTTGTTGGGATCATCAGTGACGTTCAAGTCGATAACCAAGGCCACGGACAGTTAG 1464 0.4658 MSSSSDKNDLNSSSSLSKLPLRKIPGDYGLPFFGAIKDRLDYFYKQGREEFFNARMHKYQSTVFRANMPPGPFMASNPNVIVLLDSISFPILFDTSKVEKRNVLDGTYMPSTAFTGGYRVCAYLDPSETNHALLKRLFMSALAARHHNFIPLFRSSLSELFTSLEDDISSKGEADFNDISDNMSFNFVFRLFCDKYPSETALGSQGPSIVTKWLFFQLAPLITLGLSLLPNFVEDLLLHTFPLPSIFVKSDYKKLYRAFYASASSILDEAESMGIKRDEACHNLVFLAGFNAYGGMKALFPSLIKWVGSAGEKLHRELADEIRTVVKAEGGVSFAALEKMSLTKSVVYEALRIDPPVPFQYGKAKEDMVIHSHDAAFEIKKGEMIFGYQPFATKDPKVFDNPEEFMGNRFMGEGERLLKYVYWSNGRESGNPTVENKQCAGKDLVLLLSRVMLVEFFLRYDTFDIESGTLLLGSSVTFKSITKATDS* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0597 487 PRINTS E-class P450 group IV signature 340 356 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0597 487 PRINTS E-class P450 group IV signature 377 391 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0597 487 PRINTS E-class P450 group IV signature 393 411 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0597 487 Gene3D Cytochrome P450 15 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0597 487 CDD CYP74 55 479 - -
Vvi3g0597 487 PANTHER CYTOCHROME P450 26 18 460 - -
Vvi3g0597 487 FunFam Allene oxide synthase, chloroplastic 19 486 - -
Vvi3g0597 487 Pfam Cytochrome P450 316 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0597 487 SUPERFAMILY Cytochrome P450 19 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0597 Vvi-Chr3 5156561 5158024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0597 2 485 Cytochrome P450 AT5G42650 54.713 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0597 K01723 - vvi:100253713 949.503