Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0585 ATGGGATTCTCCCTTCAGCCACAAGATATCACAGTTTTTGGGCTTCTTCTTGCTACAATCTGTTTGTTGTTGGCAACGGTATTTAATGCCAAAGGGAACAAGAAGAAAGGCAAAAGGCCACAGGAGCCGTCCGGGCGATGGCCTATTATCGGTCACCTTCATCTTCTAGGAGCAGACAAGCTGCCACATCGGACACTTGGAGACATGGCTGATAAGTATGGACCAATCTTTTGCATTCATCTTGGCCTTCGTAAAGCTCTGGTGGTTAGTAGCTGGGAAGTAGCAAAGGAATGCTACACTACCAATGACAAGGTATTCGCCACTCGACCAAGATCCTTAGCAGTAAAGCTCATGGGCTATGATCATGCCATGTTAGGATTTGCTCCCTATGGACCATACTGGCGTGATGTGCGGAAGCTAGCCATGGTTGAGCTCCTCTCAAACCGCCAGCTTGAGATGCTCAAACATGTCCAGGACTCAGAAGTTGAGTTCTTAATAAAAGAGCTCTATGGGCAATGGGCACGAAACAAGGACAGCCCCGCTTTGGTGGAGATGAAGGAAAGATTTGGGAACTTGGTAATGAATGTAATGGTGAGAGCAATTGCAGGGAAACGGTATTTTGGGACCCATGCCTGTGATGATGAGCCAAAACGGGGCAAAAAGGCCTTGGACGATTTTATGCTTCTAGTGGGGCTGTTCATGGTCTCGGATGCCATCCCTTTTCTCGGCTGGTTGGACACGGTGAAAGGGTATACCACTGATATGAAGAAAATAGCTAAGGAGTTGGATTATTTGCTTGGAAGGTGGGTGGAGGAGCATCGCCAGCAAAGGCTTTCCGCAAACAACAACAGGGCTGAGGTAGACTTCCTCCATGTCATGCTTTCCGTCATAGATGATGGCCAATTCTCTGGTCGTGATCCTGATACCGTCATTAAGGCCACTTGCTTGAACCTCATATTAGCTGGCTATGACACAACATCTATCACTCTTACATGGGCCCTCTCTCTTCTACTGAACAACCGCCATGCGCTAAAAAAGGCACAAGCAGAGCTGGAAATCCATGTGGGTAAGCATCGCCAAGTGGATGGATCAGATATAAAGAACCTAGTCTACCTGCAAGCCATCGTCAAGGAAACATTACGATTGTACCCTCCTGGGCCACTTTCCGTGCCGCATGAGGCCATGGAAGATTGCACTGTGGCAGGCTTTCACATCCAAGCTGGGACGCGCCTTTTGGTTAATCTCTGGAAGTTGCATCGTGACCCCAGAGTCTGGTTGGACCCTTTGGAGTTCCAACCAGAGAGGTTCCTGACAAACCATGCAGGTTTGGATGTTAGGGGTAAAAATTATGAACTTCTACCCTTTGGTTCAGGTAGAAGGGTATGCCCAGGAATCTCATTTGCACTGGAGTTGACGCATCTGGCACTAGCCAGACTGCTTCATGGTTTTGAATTGGGAGTAGTTGCAGATTCACCGGTGGATATGACTGAAGGTCCTGGGTTGAGTGCCCCCAAAGCAACCCCGCTGGAGGTCACCATTGTTCCAAGGCTACCTTTCGAGCTCTATAGTTATGAAGCAGCATAG 1584 0.4848 MGFSLQPQDITVFGLLLATICLLLATVFNAKGNKKKGKRPQEPSGRWPIIGHLHLLGADKLPHRTLGDMADKYGPIFCIHLGLRKALVVSSWEVAKECYTTNDKVFATRPRSLAVKLMGYDHAMLGFAPYGPYWRDVRKLAMVELLSNRQLEMLKHVQDSEVEFLIKELYGQWARNKDSPALVEMKERFGNLVMNVMVRAIAGKRYFGTHACDDEPKRGKKALDDFMLLVGLFMVSDAIPFLGWLDTVKGYTTDMKKIAKELDYLLGRWVEEHRQQRLSANNNRAEVDFLHVMLSVIDDGQFSGRDPDTVIKATCLNLILAGYDTTSITLTWALSLLLNNRHALKKAQAELEIHVGKHRQVDGSDIKNLVYLQAIVKETLRLYPPGPLSVPHEAMEDCTVAGFHIQAGTRLLVNLWKLHRDPRVWLDPLEFQPERFLTNHAGLDVRGKNYELLPFGSGRRVCPGISFALELTHLALARLLHGFELGVVADSPVDMTEGPGLSAPKATPLEVTIVPRLPFELYSYEAA* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0585 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Vvi3g0585 527 FunFam Cytochrome P450 82C4 30 514 - -
Vvi3g0585 527 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0585 527 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0585 527 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0585 527 PANTHER CYTOCHROME P450 82C3-RELATED 19 522 - -
Vvi3g0585 527 SUPERFAMILY Cytochrome P450 46 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0585 527 Gene3D Cytochrome P450 29 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0585 527 Pfam Cytochrome P450 40 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0585 527 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0585 527 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0585 527 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0585 527 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0585 527 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0585 527 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0585 527 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0585 527 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0585 527 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0585 527 CDD CYP82 74 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0585 Vvi-Chr3 5037316 5039213 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0585 9 522 Cytochrome P450 AT4G31940 52.672 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0585 - - vvi:100265877 1061.6