Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0584 ATGGTTTCTGATGCAATTCCCTCCCTTGGCTGGTTGGACACTGTGAGAGGATATACGGCAAAAATGAAGAGAATAGCTAGGGAGGTGGATCAGGTGCAGGGAAGCTGGGTGGAGGAGCATCGCCGGAAGAGGTTCTCTGGAAGCATGAACGAGGCTGTGCAAGACTTCATCCATGTCATGCTGTCTGTTATTGATGATGGTCAGTTCTCTGATCATGACCATGACACTGTCATTAAGGCTACTTGCTTGACTCTAATAATAGGCGGCTCTGATTCAACGGTGATCACACTGACCTGGGCCCTCTGTCCGCTAATGAACAATCCCAGCACTCTAAAAAGAGCACAAGATGAGTTAGACATCAAAGTGGGAAAGCATCGCCAAGTGGATGAGTCAGACATAAAGAACCTAGTCTACTTGCAAGCCATCATCAAGGAAACCTTACGACTGTACCCTGCTGCACCGCTTTCAGTGCCACGTGAGGCCATGGAGGATTGCACCATGGCAGACTTCCACATCCAAGCTGGGCGCGCCTTTTGGTTAACCTCTGGAAGTTGCACAGGGACCCCAGAATTTGGTCGGATCCTTTGGAGTTCCAACCTGAGAGGTTTCTAA 612 0.4951 MVSDAIPSLGWLDTVRGYTAKMKRIAREVDQVQGSWVEEHRRKRFSGSMNEAVQDFIHVMLSVIDDGQFSDHDHDTVIKATCLTLIIGGSDSTVITLTWALCPLMNNPSTLKRAQDELDIKVGKHRQVDESDIKNLVYLQAIIKETLRLYPAAPLSVPREAMEDCTMADFHIQAGRAFWLTSGSCTGTPEFGRILWSSNLRGF* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0584 203 FunFam Uncharacterized protein 22 191 - -
Vvi3g0584 203 SUPERFAMILY Cytochrome P450 2 179 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0584 203 Pfam Cytochrome P450 20 184 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0584 203 PRINTS P450 superfamily signature 141 152 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0584 203 PRINTS P450 superfamily signature 88 105 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0584 203 Gene3D Cytochrome P450 1 191 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0584 203 PANTHER CYTOCHROME P450 82C3-RELATED 1 176 - -
Vvi3g0584 203 PRINTS E-class P450 group I signature 140 158 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0584 203 PRINTS E-class P450 group I signature 97 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0584 203 PRINTS E-class P450 group I signature 77 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0584 Vvi-Chr3 5025540 5026440 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0584 2 175 Cytochrome P450 AT4G31940 54.237 4.29e-59 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0584 - - vvi:100262353 338.576