Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0583 ATGGCAGATAAGTATGGACCAATCTTTTGCTTTCATATTGGCCTGCGCAAAACTTTTTTGGTTAGCAGCTGGGACGCAGCAAAAGAATGTTTCACTACCATGGACAAAGCATTTGACACTCGACCCAGATCCTTGGCAGGAAAGCTCATGGGCTATGACCATGCCATGTTTGGCTTCTCTCCTTACGGGCCATACTGGCGTGAGGTAAGGAAGCTGGCCTCGGTTGAGCTCCTCTTAAACCGCCAGCTTGAGTTACTCAACCATGTCCGGGACTCAGAAGTCAAGCTTTTCATCAAAGAGCTCTACGGGCAATGGATACAAAATGGGGACAGGCCTGTCTTGGTCGAGATGAAGGAGAAGTGTTGGTTCCTGGCAGCAAATGTAATGGTGAGCGAAGTAGCTGGGAAACGGTATTTTGGCACCGTTACAAATTGA 435 0.4828 MADKYGPIFCFHIGLRKTFLVSSWDAAKECFTTMDKAFDTRPRSLAGKLMGYDHAMFGFSPYGPYWREVRKLASVELLLNRQLELLNHVRDSEVKLFIKELYGQWIQNGDRPVLVEMKEKCWFLAANVMVSEVAGKRYFGTVTN* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0583 144 Gene3D Cytochrome P450 1 143 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0583 144 PANTHER CYTOCHROME P450 82C3-RELATED 1 141 - -
Vvi3g0583 144 Pfam Cytochrome P450 2 125 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0583 144 SUPERFAMILY Cytochrome P450 1 138 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0583 144 PRINTS E-class P450 group I signature 26 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0583 144 PRINTS E-class P450 group I signature 124 142 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0583 144 PRINTS E-class P450 group I signature 2 21 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0583 Vvi-Chr3 5021172 5021606 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0583 1 140 Cytochrome P450 AT4G31970 50.355 6.61e-46 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0583 - K23136 vri:117911625 241.506