Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0582 ATGGGTCACCTTCATCTTCTAGGAGCAGATAAGCCACTACATAGGACATTCGGAGCCATGGCTGATGAGTATGGACCAATCTTCTCCATTCGTGTTGGCCTTCGAACAGCTCTGGTGGTTAGTAGCTCGGAAGTAGCAAAAGAATGTTACACTACCAAGGACAAGGCACTCGCCACTCGACCAAGATCCTTAGCAGTAAAGCTCATGGGCTATGACCATGCCATGTTTGCGTTTGAACGTCACGGTCCATACTGGCGTGATGTGCGGAGGCTAGCCATGGTTAATCTCCTCTCCAACCGCCAGCACGAGATGCTCAAGCATGTCCGGGACTCAGAAGTCAAGTTTTTCATCCAAGAGCTCTATGGGCAATGGGTAGAAAATGGAGGCAGTCCTGTTTTGGTGGACATGAAGAAAAAGTTTGAGCACCTGGTAGCAAATTTGACGATGAGAACAGTTGCTGGGAAACGGTGTGAAAATGGCGAGTCAAGATGGTGCCAATCCCTAGGTGATTTCATGAATCTAATGGGGCAATTTATGGTTTCTGATGCACTACCCTTCCTTGGATGGTTAGACACAGTGAGGGGATATACAGCGAAAATGAAGGGAACAGCTAGGCAGTTGGATCGGGTTATTGGAAGATGGGTGGAGGAGCATCGTCAGAAGAGGCTTTCCGGAAGCATCAATGACGCTGAGCAAGACTTCATTCATGCCATGCTGTCTGTTATAGATGATGCTCAGTTATCTGGTCATGACCATGACCATGATACTGTCATCAAAGCCACTTGCTTGACTGTCATGTTGGCGGGCAATGATACAATAGCGGTCACACTCACCTGGGCCCTCTCTCTGCTAATGAACAACCCTCGTGCACTAAAAAAGGCACAAGAAGAGTTGGACTTTCATGTGGGAAGGAATCAGCAAGTGTACGAATCAGATATAAAGAAGCTAGTCTACTTGCAAGCCATTATCAAGGAGACCTTACGACTATACCCTGCTGGGCCGCTTGCACTGCCACATGAGGCCATGGAGGACTGCACTATTGCAGGCTTCCACATCCAAGCTGGGACTCGCCTTCTGGTTAACCTCTGGAAGTTACACCGCGATCCCACAATTTGGTCGGATCCTTTGGAGTTCCAACCTGAGAGGTTCCTGACAAAGCATGTGGGTTTGGACGTTGGGGGTCAACATTTTGAACTTCTACCATTTGGGTCAGGCAGAAGGATGTGCCCAGGAATCTCACTTGCTCTGGAGATCCTGCAGCTGACACTAGCCAGATTGCTTCATGGTTTTGAATTGGGAGTAGTTTCAGATTCACCCCTGGATATGACTGAAGGTGTTGGGCTCGCTATGCCTAAAGCAACTCCACTGGAGGTCACCCTAGTCCCAAGGCTACCCTCCGAGCTCTACCACTAA 1413 0.489 MGHLHLLGADKPLHRTFGAMADEYGPIFSIRVGLRTALVVSSSEVAKECYTTKDKALATRPRSLAVKLMGYDHAMFAFERHGPYWRDVRRLAMVNLLSNRQHEMLKHVRDSEVKFFIQELYGQWVENGGSPVLVDMKKKFEHLVANLTMRTVAGKRCENGESRWCQSLGDFMNLMGQFMVSDALPFLGWLDTVRGYTAKMKGTARQLDRVIGRWVEEHRQKRLSGSINDAEQDFIHAMLSVIDDAQLSGHDHDHDTVIKATCLTVMLAGNDTIAVTLTWALSLLMNNPRALKKAQEELDFHVGRNQQVYESDIKKLVYLQAIIKETLRLYPAGPLALPHEAMEDCTIAGFHIQAGTRLLVNLWKLHRDPTIWSDPLEFQPERFLTKHVGLDVGGQHFELLPFGSGRRMCPGISLALEILQLTLARLLHGFELGVVSDSPLDMTEGVGLAMPKATPLEVTLVPRLPSELYH* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0582 470 Gene3D Cytochrome P450 1 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0582 470 PANTHER CYTOCHROME P450 82C3-RELATED 1 469 - -
Vvi3g0582 470 SUPERFAMILY Cytochrome P450 2 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0582 470 CDD CYP82 25 463 - -
Vvi3g0582 470 PRINTS E-class P450 group I signature 21 40 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0582 470 PRINTS E-class P450 group I signature 257 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0582 470 PRINTS E-class P450 group I signature 361 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0582 470 PRINTS E-class P450 group I signature 143 161 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0582 470 PRINTS E-class P450 group I signature 45 66 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0582 470 PRINTS E-class P450 group I signature 320 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0582 470 PRINTS E-class P450 group I signature 409 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0582 470 PRINTS E-class P450 group I signature 277 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0582 470 PRINTS E-class P450 group I signature 399 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0582 470 PRINTS P450 superfamily signature 321 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0582 470 PRINTS P450 superfamily signature 268 285 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0582 470 PRINTS P450 superfamily signature 400 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0582 470 PRINTS P450 superfamily signature 409 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0582 470 FunFam Cytochrome P450 82C4 1 461 - -
Vvi3g0582 470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 402 411 IPR017972 GO:0005506|GO:0016705
Vvi3g0582 470 Pfam Cytochrome P450 1 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0582 Vvi-Chr3 5016787 5018886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0582 1 469 Cytochrome P450 AT4G31940 51.553 8.57e-180 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0582 - - vvi:100267513 954.51