Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0581 ATGAAGAGAACAGCTAGGGAGGTGGATCAGGTGCAGGGAAGCTGGGTGGAGGAGCATCGCCGGAAGAGGTTCTCTGGAAGCATGAACGAGGCTGAGCAAGACTTCAACCATGTCATGCTGTCTGTTATTGAGGATGGTCAGTTCTCTGATCATGACCATGACACTGTCATTAACGCTACTTGCTTGACTCTAATAATAGGCGGCTCTGATTCAACGGTGATCACACTGACCTGGGCCCTCTGTCCGCTAATGAACAATCCCAGCACTCTAAAAAGAGCACAAGATGAGTTAGACATCAAAGTGGGAAAGCATCGCCAAGTGGATGAGTCAGACATAAAGAACCTAGTCTACTTGCAAGCCATCATCAAGGAAACCTTACGACTGTACCCTGCTGCACCGCTTTCAGTGCCACGTGAGGCCATGGAGGATTGCACCATGGCAGGCTTCCACATCCAAGCTGGGACGCGCCTTTTGGTTAACCTCTGGAAGTTGTACAAGAACCCCAGAATTTGGTCGGATCCTTTGGAGTTCCAACCTGAGAGGTTCCTAACGAAGCATGTGGATTTGGATGTTAGGGGTCAAAATTTTGAATTTCTGCCATTTGGGTCAGGCAGAAGGGTATGCCCAGGAATCTCATTTGCGCTTGAGTTTCTTGTTTGTGTTGAGCCTAGCTCATATTTTTAA 684 0.4825 MKRTAREVDQVQGSWVEEHRRKRFSGSMNEAEQDFNHVMLSVIEDGQFSDHDHDTVINATCLTLIIGGSDSTVITLTWALCPLMNNPSTLKRAQDELDIKVGKHRQVDESDIKNLVYLQAIIKETLRLYPAAPLSVPREAMEDCTMAGFHIQAGTRLLVNLWKLYKNPRIWSDPLEFQPERFLTKHVDLDVRGQNFEFLPFGSGRRVCPGISFALEFLVCVEPSSYF* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0581 227 PRINTS E-class P450 group I signature 76 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0581 227 PRINTS E-class P450 group I signature 198 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0581 227 PRINTS E-class P450 group I signature 56 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0581 227 PRINTS E-class P450 group I signature 119 137 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0581 227 PRINTS E-class P450 group I signature 160 184 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0581 227 FunFam Uncharacterized protein 1 221 - -
Vvi3g0581 227 PRINTS P450 superfamily signature 120 131 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0581 227 PRINTS P450 superfamily signature 67 84 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0581 227 PRINTS P450 superfamily signature 208 219 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0581 227 PRINTS P450 superfamily signature 199 208 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0581 227 Gene3D Cytochrome P450 1 221 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0581 227 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 201 210 IPR017972 GO:0005506|GO:0016705
Vvi3g0581 227 SUPERFAMILY Cytochrome P450 2 218 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0581 227 Pfam Cytochrome P450 4 214 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0581 227 PANTHER CYTOCHROME P450 82C3-RELATED 1 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0581 Vvi-Chr3 5007159 5008252 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0581 1 218 Cytochrome P450 AT4G31940 56.757 2.11e-87 266