Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0576 ATGAAGAAAATAGCTAAGAAGGTGGATTATTTGCTTAGAAGGTGGGTGGAGGAGCATCGCCAACAAAGGCTTTCCGCAAAGAATAACAGAGTTGAGGTAGACTTCCTCCATGTCATGCTTTCTGTCATAGATGATGGCCAATTCTCTGGTCGTGATCCTGATACCGTCATTAAGGCCACTTGCTTGAACCTTATATTAGCTAGCTATGACACAACCGCTATCACTCTTACATGGGCCCTCTCTCTTCTACTGAACAACCGCCACGCGCTAAAAAAATCACAAGCAGGGATGGAAATCCATGTGGGTAAGCATCGCCAAGTGGATGGATCAGATATAAAGAACCTAGTCTACCTACAAGCCATCGTCAAGGAAACATTACGATTGTACCCTCCTGGGCCACTTTCCGTGCCGCATGAGGCCATAGAAGATTGCACTGTGGCAGGCTTTCACATCCAAGCTGGGACGCGCCTTTTGGTTAATCTTTGGAAGTTGCATCGTGACCCCAGAGTCTAG 513 0.4698 MKKIAKKVDYLLRRWVEEHRQQRLSAKNNRVEVDFLHVMLSVIDDGQFSGRDPDTVIKATCLNLILASYDTTAITLTWALSLLLNNRHALKKSQAGMEIHVGKHRQVDGSDIKNLVYLQAIVKETLRLYPPGPLSVPHEAIEDCTVAGFHIQAGTRLLVNLWKLHRDPRV* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0576 170 FunFam Uncharacterized protein 1 170 - -
Vvi3g0576 170 Gene3D Cytochrome P450 1 170 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0576 170 PRINTS E-class P450 group I signature 160 170 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0576 170 PRINTS E-class P450 group I signature 76 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0576 170 PRINTS E-class P450 group I signature 56 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0576 170 PRINTS E-class P450 group I signature 119 137 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0576 170 PRINTS P450 superfamily signature 67 84 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0576 170 PRINTS P450 superfamily signature 120 131 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0576 170 SUPERFAMILY Cytochrome P450 2 170 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0576 170 PANTHER CYTOCHROME P450 82C3-RELATED 1 170 - -
Vvi3g0576 170 Pfam Cytochrome P450 2 169 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0576 Vvi-Chr3 4987707 4988534 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0576 1 170 Cytochrome P450 AT4G31940 56.395 1.49e-65 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0576 - - vvi:100265877 325.865