Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0575 ATGAACCTGTTTTGTGATAATAAGCCCTCATCTATTGTATCTTTTACATATAGAAGAATACCATTTTTCTTCTCCTCAACAATCATAGGATTCTCCCTTCAGCCACAAGATATCATAGTTTTTGGGCTTCTTCTTGCTACAATATGTTTGTTGTTGGCAACGGTATTTAATGCCAAATGGAACAAGAAGAAAGGCAAAAGGCCACAGGAGCCGTCCGAGCGATGGCCTATTATCGGTCACCTTCATCTTCTAAGAGCAGACAAGCTGCTATATCGGACACTTGGAGACATGGCCGATAAGTATGGACCAATCTTTTGCATTCATCTTGGCCTTCGTAAAGCTTTGGTGGTTAGTAACTGGGAAGTAGCAAAGGAATGCTACACTACCAATGACAAGGTATTCGCCACTCGACCAAGATCCTTAGCAGTAAAGCTCATGGGCTATGATCATGCCATGTTTGGATTTGCTCCCTATGGACCATACTGGCGTGATGTGCAGAAGCTAGCCATGGTTGAGCTCCTCTCAAACTGCCAGCTTGAGATGCTCAAACATGTCCAGGACTCAAAGGTTGAGTTCTTAATAAAAGAGATCTATGGGATGGGCACGAAACAAGGAAAGCCCCACTTTGGTGGAGATGAAGGAAAGATTTGGGAACTTGGTAATGAATGTAATGGTGAGCGCAACTGCAGGGAAACGGTATTTTGGGACCCATGCCTGTGGTGA 723 0.4398 MNLFCDNKPSSIVSFTYRRIPFFFSSTIIGFSLQPQDIIVFGLLLATICLLLATVFNAKWNKKKGKRPQEPSERWPIIGHLHLLRADKLLYRTLGDMADKYGPIFCIHLGLRKALVVSNWEVAKECYTTNDKVFATRPRSLAVKLMGYDHAMFGFAPYGPYWRDVQKLAMVELLSNCQLEMLKHVQDSKVEFLIKEIYGMGTKQGKPHFGGDEGKIWELGNECNGERNCRETVFWDPCLW* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0575 240 Pfam Cytochrome P450 69 195 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0575 240 PANTHER CYTOCHROME P450 82C3-RELATED 47 203 - -
Vvi3g0575 240 Gene3D Cytochrome P450 60 219 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0575 240 SUPERFAMILY Cytochrome P450 67 202 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0575 240 PRINTS E-class P450 group I signature 122 143 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0575 240 PRINTS E-class P450 group I signature 98 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0575 Vvi-Chr3 4986479 4987585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0575 37 205 Cytochrome P450 AT4G31970 47.647 3.26e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0575 - - vvi:100265877 320.087