Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0574 ATGAATTCGACCTGTCAATTTTCTCAATGTAATCACCTTTTATTTATATTTTTTCTCTATGTAATCCCGTTTTATATATTTTTTTTACATCTAAGAAGCACTCACAGAAAGTGTGACCTGGTATGTATAAATATCTCTGTTCTGAACAGAGAAAACTGTGAAAACAGAATATATAGAAAACCATTTTTCTCTCTCCGACCCTCTTTCTCTTCACTCTGGTACAATCTAGTCATGGGATTCTCCCTTCGCCCTCAAGATATCACAGTTTTTGGGCTTCTTCTTGCTACAATCTGTCTGTTGTTGGCAACAGTACTTAATGCCAAAGGGAACAAGAAGAGAGGCAAAAGGCCACCAGAGCCGTCCGGGCGATGGCCTCTTATCGGTCACCTTCATCTTCTAGGAGCAGACAAGCTGCTACATCGGACACTTGGAGACATGGCTGATAAGTATGGACCCATCTTTTGCGTTCGTCTTGGCCTCAAAAAAACATTGGTGGTTAGTAGCTGGGAAGTAGCAAAGGAATGTTACACTACAAGTGACAAGGTATTCGCAACTCGACCAAGATCCTTAGCAATAAAGCTCATAGGCTATGATCATGGCTCGTTTGTCTTTGCTCCTTATGGACCATACTGGCGTGATGTGCGGAAGTTAGCCATGGTTGAGCTGCTGTCAAACCGCCAGCTTGAGATGCACAAGCATGTCCAGGACTCAGAAGTCAAGATCTTAATAAAAGAGCTTTATGGGCAATGGGCAAGCAACAAGGACGGCCCCGCTTTGGTGGAGATGAAGGAAAGATTTGGGAACTTGGCACTGAACGTAGTGGTGAGAGCAATTGCTGGGAAACGGTATTTTGGGACCCATGCCTGTGGTGATGAGCCAAAACGGGCCAAGAAGGCCTTTGAGGATTTCATTATTCTACTGGGGCTGTTCATGGTCTCGGATGTCATCCCTTTTCTCGGCTGGTTGGACACGATGAAAGGGTTTACCGCTGAAATGAAGAGAGTAGCTAAGGAGGTGGATTATGTGCTTGGAAGCTGGGTGGAGGAGCATCGCCAGAATAGGCTTTCTGCGAACGACAATGGGGCTGAGCAAGACTTCATACATGCCATGCTTTCTGTCATAGATGATGGCCAATTCTCTGGTCGTGATCCTGACACCATCATTAAGGGCACTTGCTCGAACCTCATATTAGCTGGCAATGACACAACATCTATCACTCTTACATGGGCCCTCTCTCTTCTACTGAACAACCGCCATGCGCTAAAAAAAGCACAAGCAGAGCTGGAAATCCATGTGGGAAAGCATCGCCAAGTGGATGGATCAGATATAAAAAACCTCGTCTACTTGCAAGCCATCGTCAAGGAAACATTACGATTGTACCCTCCTGGGCCACTTTCCCTGCCACATGAGGCCATGGAAGATTGCACTGTGGCTGGCTTTCACATCCAAGCTGGGACGCGCCTTTTGGTTAATCTCTGGAAGTTGCATCGTGACCCCAGAGTCTGGTTGGACCCTTTGGAGTTCCAACCAGAGAGGTTCCTGACAAAGCATGCAGGTTTGGATGTTAGGGGTAAAAATTATGAACTTCTACCCTTTGGTTCAGGTAGAAGGGTATGCCCAGGAATCTCATTTGCACTGGAGTTGACGCATCTGACGCTAGCCAGACTGCTTCATGGTTTTGAATTGGGAGCGGTTGCAGATTCACCGGTGGATATGACTGAAAGTCCTGGGTTGACTGCCCCCAAAGCAACCCCACTGGAGGTCACCATTGTTCCAAGGCTACCTTTCGAGCTCTATAGTTATGAAGCAGCATAG 1815 0.465 MNSTCQFSQCNHLLFIFFLYVIPFYIFFLHLRSTHRKCDLVCINISVLNRENCENRIYRKPFFSLRPSFSSLWYNLVMGFSLRPQDITVFGLLLATICLLLATVLNAKGNKKRGKRPPEPSGRWPLIGHLHLLGADKLLHRTLGDMADKYGPIFCVRLGLKKTLVVSSWEVAKECYTTSDKVFATRPRSLAIKLIGYDHGSFVFAPYGPYWRDVRKLAMVELLSNRQLEMHKHVQDSEVKILIKELYGQWASNKDGPALVEMKERFGNLALNVVVRAIAGKRYFGTHACGDEPKRAKKAFEDFIILLGLFMVSDVIPFLGWLDTMKGFTAEMKRVAKEVDYVLGSWVEEHRQNRLSANDNGAEQDFIHAMLSVIDDGQFSGRDPDTIIKGTCSNLILAGNDTTSITLTWALSLLLNNRHALKKAQAELEIHVGKHRQVDGSDIKNLVYLQAIVKETLRLYPPGPLSLPHEAMEDCTVAGFHIQAGTRLLVNLWKLHRDPRVWLDPLEFQPERFLTKHAGLDVRGKNYELLPFGSGRRVCPGISFALELTHLTLARLLHGFELGAVADSPVDMTESPGLTAPKATPLEVTIVPRLPFELYSYEAA* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0574 604 Gene3D Cytochrome P450 103 590 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0574 604 Pfam Cytochrome P450 117 581 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0574 604 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 532 541 IPR017972 GO:0005506|GO:0016705
Vvi3g0574 604 FunFam Cytochrome P450 82C4 107 591 - -
Vvi3g0574 604 PRINTS P450 superfamily signature 530 539 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0574 604 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0574 604 PRINTS P450 superfamily signature 398 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0574 604 PANTHER CYTOCHROME P450 82C3-RELATED 95 599 - -
Vvi3g0574 604 SUPERFAMILY Cytochrome P450 117 593 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0574 604 CDD CYP82 151 593 - -
Vvi3g0574 604 PRINTS E-class P450 group I signature 387 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0574 604 PRINTS E-class P450 group I signature 539 562 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0574 604 PRINTS E-class P450 group I signature 269 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0574 604 PRINTS E-class P450 group I signature 407 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0574 604 PRINTS E-class P450 group I signature 171 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0574 604 PRINTS E-class P450 group I signature 529 539 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0574 604 PRINTS E-class P450 group I signature 147 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0574 604 PRINTS E-class P450 group I signature 491 515 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0574 604 PRINTS E-class P450 group I signature 450 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0574 Vvi-Chr3 4973810 4975934 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0574 118 599 Cytochrome P450 AT4G31940 53.455 0.0 541