Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0573 ATGGAGGATTGCACCGTGGCAGGCTTCCACATCCAAGCTGGGACGCGCCTTTTGGTTAACCTCTGGAAGTTGCACAGGGACCCCAGAATTTGGTCGGATCCTTTGGAGTTCCAACCTGAGAGGTTTCTAACGAAGCATGTGGATTTGGATGTTAGGGGTCGAAATTTTGAATTTCTGCCATTTGGGTCAGGCAGAAGGGTATGCCCAGGAATCTCATTTGCGCTTGAGGTCGTGCATCTGACACTAGCCAGACTGCTTCATGGTTTTGAATTGGGAGTGGTTGCGGATTTACCAGTGGATAGGACTGAGGGGGGTGTTTGGTACACAGGAATAGGGAGTGGGAATAGACATCTCATTCCTTTTCTCCCTTATTCCTATGTTTGGATAAATGTTAAGAAGGCAGAAATGAAATAA 414 0.4734 MEDCTVAGFHIQAGTRLLVNLWKLHRDPRIWSDPLEFQPERFLTKHVDLDVRGRNFEFLPFGSGRRVCPGISFALEVVHLTLARLLHGFELGVVADLPVDRTEGGVWYTGIGSGNRHLIPFLPYSYVWINVKKAEMK* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0573 137 PRINTS E-class P450 group I signature 20 44 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0573 137 PRINTS E-class P450 group I signature 68 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0573 137 PRINTS E-class P450 group I signature 58 68 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0573 137 PANTHER CYTOCHROME P450 82C3-RELATED 1 104 - -
Vvi3g0573 137 Pfam Cytochrome P450 2 94 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0573 137 Gene3D Cytochrome P450 1 109 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0573 137 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 61 70 IPR017972 GO:0005506|GO:0016705
Vvi3g0573 137 SUPERFAMILY Cytochrome P450 1 102 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0573 Vvi-Chr3 4968690 4969103 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0573 1 104 Cytochrome P450 AT4G31940 58.095 4.76e-42 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0573 - K23136 vvi:100260701 196.438