Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0572 ATGTTAAAATTAGGAGTCTTGGGTCTATTTTGGGAAGCAAAAGAATGTTTCACTACCATGGACAAAGCATTTGACACTCGACCCAGATCCTTCGCAGGAAAGCTCATGGGCTATGACCATGCCATGTTTGGCTTCTCTCATTACGGGCCATACTGGCATGAGGTAAGGAAGCTGGTCTCGGTTGAGCTCCTCTTAAACCGCCAGCTTGAGTTACTCAACCATGTCCGGGACTCAGAAGTCAAGCTTTTCATCAAAGAGCTCTACGGGCAATGGATACAAAATGGGGACAGGCCTGCCTTGGTCGTGATGAAGGAGAAATGTTGGCACCTGGCAATGAAAAGAAGAAGAATTGGCTGA 357 0.4706 MLKLGVLGLFWEAKECFTTMDKAFDTRPRSFAGKLMGYDHAMFGFSHYGPYWHEVRKLVSVELLLNRQLELLNHVRDSEVKLFIKELYGQWIQNGDRPALVVMKEKCWHLAMKRRRIG* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0572 118 FunFam - 12 113 - -
Vvi3g0572 118 PANTHER CYTOCHROME P450 82C3-RELATED 13 113 - -
Vvi3g0572 118 Gene3D - 12 113 - -
Vvi3g0572 118 SUPERFAMILY Cytochrome P450 13 107 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0572 Vvi-Chr3 4959953 4962755 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0572 6 105 Cytochrome P450 AT4G31940 46.535 1.95e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0572 - - vri:117911625 160.229