Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0571 ATGGCTGATGAGTATGGACCAATCTTCTCCATTCGTCTTGGCCTTCGAACTGCTCTGGTGGTTAGTAGCTCGGAAGTAGCAAAAGAATGTTACACTACCAAGGACAAGGCACTCGCCACTCGACCAAGATCCTTAGCAGTAAAGCTCATGGGCTATGACCATGCCATGTTTGCGTTTGAACGTCACGGTCCATACTGGCGTGATGTGCGGAGGCTAGCCATGGTTAATCTCCTCTCCAACCGCCAGCACGAGATGCTCAAGCATGTCCGGGACTCAGAAGTCAAGTTTTTCATCCAAGAGCTCTATGGGCAATGGGTAGAAAATGGAGGCAGCCCTGTTTTGGTGGACATGAAGAAAAAGTTTGAGCACCTGGTAGCAAATTTGACGATGAGAACAGTTGCTGGGAAACGGTGTGAAAATGGCGAGTCAAGATGGTGCCAAGCCCTAGGTGATTTCATGAATCTAATGGGGCAATTTATGGTTTCTGATGCAGTACCCTTCCTTGGATGGTTAGACACAGTGAGGGGATATACAGCAAAAATGAAGGGAACAGCTAGGCAGTTGGATCAGGTTCTTGGAAGATGGGTGGAGGAGCATCGTCAGAAGAGGCTTTCCGGAAGCATCAATGAGGCTGAGCAAGACTTCATTCATGCCATGCTGTCTGTTATAGATGATGCTCAGTTATCTGCTCATGACCATGACCATGATACTGTCATCAAAGCCACTTGCTTGACTGTCATGTTGGCGGGCAATGATACAATAGCGATCACACTCACCTGGGCCCTCTCTCTGCTAATGAACAACCCTCGTGCACTAAAAAAGGCACAAGAAGAGTTGGACTTCCATGTGGGAAGGAATCAGCAAGTGTACGAATCAGATATAAAGAAGCTAGTCTACTTGCAAGCCATTATCAAGGAGACCTTACGACTATACCCTGCTGGGCCGCTTGCACTGCCACATGAGGCCATGGAGGACTGCACTATTGCAGGCTTCCACATCCAAGCTGGGACTCGCCTTCTGGTTAACCTCTGGAAGTTACACCGCGATCCCACAATTTGGTCGGATCCTTTGGAGTTCCAACCTGAGAGGTTCCTGACAAAGCATGTGGGTTTGGACGTTAGGGGTCAACATTTTGAACTTCTACCATTTGGGTCAGGCAGAAGGATGTGCCCAGGAATCTCACTTGCTCTGGAGATCCTGCAGCTGACACTAGCCAGATTACTTCATGGTTTTGAATTGGGAGTGGTTGCAGATTCACCCCTGGATATGACTGAAGGTGTTGGGCTCGCTATGCCTAAAGCAACTCCGCTGGAGGTCACCCTAGTCCCAAGGCTACCCTCCGAGCTATACCACTAA 1356 0.4897 MADEYGPIFSIRLGLRTALVVSSSEVAKECYTTKDKALATRPRSLAVKLMGYDHAMFAFERHGPYWRDVRRLAMVNLLSNRQHEMLKHVRDSEVKFFIQELYGQWVENGGSPVLVDMKKKFEHLVANLTMRTVAGKRCENGESRWCQALGDFMNLMGQFMVSDAVPFLGWLDTVRGYTAKMKGTARQLDQVLGRWVEEHRQKRLSGSINEAEQDFIHAMLSVIDDAQLSAHDHDHDTVIKATCLTVMLAGNDTIAITLTWALSLLMNNPRALKKAQEELDFHVGRNQQVYESDIKKLVYLQAIIKETLRLYPAGPLALPHEAMEDCTIAGFHIQAGTRLLVNLWKLHRDPTIWSDPLEFQPERFLTKHVGLDVRGQHFELLPFGSGRRMCPGISLALEILQLTLARLLHGFELGVVADSPLDMTEGVGLAMPKATPLEVTLVPRLPSELYH* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0571 451 Gene3D Cytochrome P450 1 444 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0571 451 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 383 392 IPR017972 GO:0005506|GO:0016705
Vvi3g0571 451 PRINTS E-class P450 group I signature 342 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0571 451 PRINTS E-class P450 group I signature 124 142 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0571 451 PRINTS E-class P450 group I signature 238 255 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0571 451 PRINTS E-class P450 group I signature 258 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0571 451 PRINTS E-class P450 group I signature 2 21 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0571 451 PRINTS E-class P450 group I signature 26 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0571 451 PRINTS E-class P450 group I signature 301 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0571 451 PRINTS E-class P450 group I signature 380 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0571 451 PRINTS E-class P450 group I signature 390 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0571 451 PRINTS P450 superfamily signature 381 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0571 451 PRINTS P450 superfamily signature 249 266 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0571 451 PRINTS P450 superfamily signature 302 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0571 451 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0571 451 FunFam Cytochrome P450 82C4 1 442 - -
Vvi3g0571 451 PANTHER CYTOCHROME P450 82C3-RELATED 1 450 - -
Vvi3g0571 451 SUPERFAMILY Cytochrome P450 1 444 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0571 451 CDD CYP82 6 444 - -
Vvi3g0571 451 Pfam Cytochrome P450 2 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0571 Vvi-Chr3 4958019 4959737 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0571 1 450 Cytochrome P450 AT4G31940 52.484 1.06e-175 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0571 - - vvi:100264141 912.524