Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0570 ATGAACAATCCCAGCACTCTAAAAAGAGCACAAGATGAGTTAGACATCAAAGTGGGAAAGCATCGCCAAGGGGATGGATCAGATATAAAGAACCTAGTCTACTTTCAAGCCATCGTCAAGGAAACATTACGACTGTACCCTCCTGGGCCACTTTCCCTGCCACGTGAGGCCATGGAAGATTGCACTGTGGCTGGCTTTCACATCCAAGCTGGGACGCGCCTTTTGGGTAATCTCTGGAAGTTGCACAAGGACCCCAGAATTTGGTCGGATCCTTTGGAGTTCCAACCTGAGAGGTTCCTAACGAAGCATGTGTATTTGGATGTTAGGGGTCAAAATTTGGAATTTCTGCCATTTGGGTCAGGCAGAAGGGTATGCCCAGGAATCTCATTTGCGCTTGAGGTCGTGCATCCGACTTATTTAAGATCATACATCAGTTGA 438 0.4726 MNNPSTLKRAQDELDIKVGKHRQGDGSDIKNLVYFQAIVKETLRLYPPGPLSLPREAMEDCTVAGFHIQAGTRLLGNLWKLHKDPRIWSDPLEFQPERFLTKHVYLDVRGQNLEFLPFGSGRRVCPGISFALEVVHPTYLRSYIS* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0570 145 PRINTS P450 superfamily signature 2 15 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0570 145 PRINTS P450 superfamily signature 125 136 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0570 145 PRINTS P450 superfamily signature 37 48 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0570 145 PRINTS P450 superfamily signature 116 125 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0570 145 SUPERFAMILY Cytochrome P450 1 135 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0570 145 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 118 127 IPR017972 GO:0005506|GO:0016705
Vvi3g0570 145 Gene3D Cytochrome P450 1 136 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0570 145 PRINTS E-class P450 group I signature 115 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0570 145 PRINTS E-class P450 group I signature 77 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0570 145 PRINTS E-class P450 group I signature 36 54 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0570 145 Pfam Cytochrome P450 1 131 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0570 145 MobiDBLite consensus disorder prediction 1 23 - -
Vvi3g0570 145 PANTHER CYTOCHROME P450 82C3-RELATED 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0570 Vvi-Chr3 4954891 4955328 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0570 1 136 Cytochrome P450 AT4G31940 61.314 1.73e-58 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0570 - - vvi:104878815 258.455