Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0569 ATGATGTCAAGATCGTATACCAATCTTTTAGATTTAGCTACTGGGAATTTTCCGGCAATCGGTCGAGAACGGAAGCGGCTTCCGAGGGTAATGACGGTTCCGGGCAATGTGTATGAACTTGATGATGATCAGGCTAATAGTGTGTCGTCTGATAACCCCTCTTCAGTTGCTCAAGATCGGTTGATTATAGTGGCAAACCAGTTGCCTGTGAAAGCTAACCGAAGAGCAGATGATAGAGGCTGGGTTTTTAGTTGGAATGAAGACTCATTGCTTCTGCAACTTAAGGAGGGTTTGCCAGAAGACATGGAAGTTCTGTATGTTGGGTCATTGAGGGTTGATGTTGACTTGACGGAACAAGAGGAAGTATCCCAGATTCTGTTGGAGACATTCAAATGTGTCCCTACTTTTCTGCCTCATGATGTTTTAGAGAAATTCTATCATGGATTCTGCAAGAAGTTGTTATGGCCGCTTTTCCATTACATGTTGCCATTTTCAGCTGATCATGGAGGTCGGTTTGATCGGTCTATGTGGGAAGCATATGTGTGGGCAAATAAGTTATTCTCACAAAAGGTTATTGAGGCGATAAACCCAGATGATGATTATGTTTGGATTCATGATTACCATTTGATGGTATTGCCAACTTTCTTGAGGAGGCACTTTAACCAGTTAAGAATGGGGTTTTTTCTTCATAGTCCATTTCCATCTTCAGAGATCTACAGGACTCTTCCTGTCAGAGAAGAAATTCTTAAGGCTTTGCTTAACTCAGACCTTATTGGTTTCCACACATTTGATTATGCTCGGCATTTCCTTTCTTGTTGCAGTCGGATGTTGGGTTTGGAGTATCAGTCAAAGAGGGGCTATATAGGGTTGGAATATTATGGAAGGACTGTGGGGATCAAGATTATGCCTGTTGGGATTCATATGGGCCGGATTGCTTCAGTGATGAAGCTTGCAGATAAGGAGAAGAAGGTAGGAGAGCTCAAGCAGCAGTTTGAAGGGAAAACGGTGTTGCTTGGTGTTAATGATATGGACATTTTTAAAGGTATTAATTTGAAGCTATTGGCAATGGAACAGTTGCTTCAGCAACACTCAAAGTGGCAAGGAAAGACCGTGTTGGTTCAGATTGCAAACCCTGCAAGAGGTAAAGGAGCAGATTTAGAGGAAATACAAGCTGAAATAAGGGAAAGCTGCAGAAGAATCAATGAAGAATTTGGGGAGCCCGGGTATGAACCAATAGTTTTTGTTGACAGACCAGTTTCAATCAGTGAGAGAATTGCCTATTACAGTATTGCTGAGTGTGTTGTTGTCACGGCTGTCAGGGATGGGATGAACCTTACGCCGTATGAATACATTGTTTGTAGACAAGGAACAGATGATTCTGAATCAAGTTCGGATTTGAGTGGGCCCAAGAAGAGCATGCTAGTGCTATCAGAATTTATTGGATGCTCTCCTTCACTTAGTGGGGCTATCTGTGTGAATCCATGGAATGTCGAAGCAACTGCTGAGGCAATGAATGAAGCTATTTCAATGTCTCAATCAGAGCAACTCCTGCGACATGAGAAGCATTTTCGGTATGTTAGCACCCATGATGTGGCTTATTGGTCACGAAGCTTCTTGCAAGATATGGAGAGAACCTGCTCAGAGCTCTTTAGGAGAAGATGCTGGGGAATTGGTTTAAGTTTTGGGTTCAGAGTTGTAGCACTTGATCCTAATTTTAGAAAGCTTTCAATAGAGGCTATTGTTTCGGCCTACTGTAGGGCTAAGAGTAGGGCCATACTGTTGGACTATGATGGCACTGTGATGCCCCAAAATTCCATCAACAAGGCTCCAAGTCAGGAGGTTATTTCAATTCTAAACACACTTTGCTGGGACAAGAAAAATATAGTTTTTATTGTCAGTGGAAGAGGAAGGGATAACTTAAGCCAGTGGTTTTCCCCCTGCAGGAAGCTTGGACTTGCAGCAGAAGCAATCTTAATGGAAGGAATAAATGAAGAGAATGAACGAGAAAATATTGATAATTTGGCAGAGAGTGAGGCAATTGATATGGAGCAGAATAGGAAGAATCAACCAAAGTCATCTGGAATGACTGATCAGCCCCCGCAAGCATCAACAGAATAA 2118 0.424 MMSRSYTNLLDLATGNFPAIGRERKRLPRVMTVPGNVYELDDDQANSVSSDNPSSVAQDRLIIVANQLPVKANRRADDRGWVFSWNEDSLLLQLKEGLPEDMEVLYVGSLRVDVDLTEQEEVSQILLETFKCVPTFLPHDVLEKFYHGFCKKLLWPLFHYMLPFSADHGGRFDRSMWEAYVWANKLFSQKVIEAINPDDDYVWIHDYHLMVLPTFLRRHFNQLRMGFFLHSPFPSSEIYRTLPVREEILKALLNSDLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGRIASVMKLADKEKKVGELKQQFEGKTVLLGVNDMDIFKGINLKLLAMEQLLQQHSKWQGKTVLVQIANPARGKGADLEEIQAEIRESCRRINEEFGEPGYEPIVFVDRPVSISERIAYYSIAECVVVTAVRDGMNLTPYEYIVCRQGTDDSESSSDLSGPKKSMLVLSEFIGCSPSLSGAICVNPWNVEATAEAMNEAISMSQSEQLLRHEKHFRYVSTHDVAYWSRSFLQDMERTCSELFRRRCWGIGLSFGFRVVALDPNFRKLSIEAIVSAYCRAKSRAILLDYDGTVMPQNSINKAPSQEVISILNTLCWDKKNIVFIVSGRGRDNLSQWFSPCRKLGLAAEAILMEGINEENERENIDNLAESEAIDMEQNRKNQPKSSGMTDQPPQASTE* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0569 705 Pfam Glycosyltransferase family 20 60 543 IPR001830 GO:0003824|GO:0005992
Vvi3g0569 705 Gene3D - 589 684 IPR023214 -
Vvi3g0569 705 SUPERFAMILY HAD-like 590 655 IPR036412 -
Vvi3g0569 705 MobiDBLite consensus disorder prediction 686 705 - -
Vvi3g0569 705 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 546 - -
Vvi3g0569 705 Pfam Trehalose-phosphatase 593 656 IPR003337 GO:0003824|GO:0005992
Vvi3g0569 705 MobiDBLite consensus disorder prediction 668 705 - -
Vvi3g0569 705 MobiDBLite consensus disorder prediction 668 685 - -
Vvi3g0569 705 FunFam Alpha,alpha-trehalose-phosphate synthase 316 527 - -
Vvi3g0569 705 FunFam Uncharacterized protein 52 315 - -
Vvi3g0569 705 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 28 655 IPR001830 GO:0003824|GO:0005992
Vvi3g0569 705 Gene3D Glycogen Phosphorylase B; 317 528 - -
Vvi3g0569 705 CDD GT20_TPS 60 543 IPR001830 GO:0003824|GO:0005992
Vvi3g0569 705 Gene3D Glycogen Phosphorylase B; 52 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0569 Vvi-Chr3 4947898 4950015 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0569 1 655 Trehalose Biosynthesis Gene Families AT1G06410 79.084 0.0 1078
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0569 K16055 - vvi:100253824 1412.51