Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0568 ATGGAAGATTGCATTGTGGCTGGCTTTCACATCCAAGCTGGGACGCGCCTTTTGGTTAATCTCTGGAAGTTGCATCGTGACCCCAGAGTCTGGTTAAACCCTTTGGAGTTCCAACCAGAGAGGTTCCTGACAAAGCATGCAGGTTTGGATGTTAGGGGTAGAAATTATGAACTTCTACCCTTTGGTTCAGGTAGAAGGGTATGCCCAGGAATCTCATTTGCACTGGAGTTGACGCATCTGACGCTAGCCAGACTGCTTCATGGTTTTGAATTGGGAGCGGTTGTAGATTCACGGGTGGATATGACTGAAAGTCCTGGGTTGACTGCCCTCAAAGCAACCCCACTGGAGGTCACAATTGTTCCAAGGCTACCTTTCGAGCTCTATAGTTATGAAGTAGCATAG 402 0.4801 MEDCIVAGFHIQAGTRLLVNLWKLHRDPRVWLNPLEFQPERFLTKHAGLDVRGRNYELLPFGSGRRVCPGISFALELTHLTLARLLHGFELGAVVDSRVDMTESPGLTALKATPLEVTIVPRLPFELYSYEVA* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0568 133 Gene3D Cytochrome P450 1 124 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0568 133 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 61 70 IPR017972 GO:0005506|GO:0016705
Vvi3g0568 133 Pfam Cytochrome P450 2 115 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0568 133 PANTHER CYTOCHROME P450 82C3-RELATED 1 128 - -
Vvi3g0568 133 PRINTS E-class P450 group I signature 68 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0568 133 PRINTS E-class P450 group I signature 58 68 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0568 133 PRINTS E-class P450 group I signature 20 44 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0568 133 SUPERFAMILY Cytochrome P450 1 122 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0568 Vvi-Chr3 4941938 4942339 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0568 1 128 Cytochrome P450 AT4G31950 62.016 5.05e-53 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0568 - K23136 vri:117911840 256.914