Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0522 ATGGGCCACAGAGTGCACTTTTCCTACTTCATTATTCCCTTCTTGTGTCTATTCTCATTTTTGGTTCCTTCTGCTTATAGCCAGTTTCTCGATTACAAGTTCTATGATAGATCATGCCCTGACTTGCCAGTGATAGTCGTGCGTAATGTTTGGGAAGCTTACTGGAAGGAATCCAGAGTTGCTGCAACCCTCCTTCGGTTGCACTTCCATGACTGTATAGTAAATGGCTGTGACGCCTCTGTGCTTCTTGATGACACTGAAGATTTCAAAGGGGAAAAAAGCACGCCTGTCAACCGCATGTTGCCCCTTGCATTTGAAGTCATTGACAATATAAAAGAAGATGTTGAAAGTGCTTGCCCCTCAACTGTTTCATGTGTTGATATACTGACTCTTGCAGCAAGAGAAGGTGTTATTTTGTCAGGAGGACGTTACTGGAATGTTCCATTAGGGCGACGAGATGGAACAACATCCGATCCAAAAGCAGTTGTACAGATTCCTGCACCTTTTGAGCCTCTAGAAAACATCACTGCCAAATTCACTTCAAAGGGTCTTGACCTGAAGGATGTTGTAGCACTCTCAGGAGCTCACACCATAGGTTTTGCCCAATGCTTCACCTTCAAGAGCAGGCTCTTCAACTTTCAAGGCACTGGCCAGCCTGATCCTACCCTGGATGCTTCTGTCCTCTCAGACTTGAGGAAAACTTGTCCCAACAAAGATAGTGCAGACACCAACATTGCTCCTCTTGATTCTGTAAGCACTAACAGATTTGACAATGCCTATTATGGGAACCTTGTCCGCAACACCGGCCTTCTGAAATCTGATCAAGCCTTAATGACCGATCCAGACACTGCTGCTTTAGTGAACAGATATAGAACGAACCCACGTTATTTCTTCCGTGATTTTGTTACATCCATGGTCAAGCTGAGCTATGTTGGGATACTCACAGGGGAAAAAGGGCAAATCAGGAAGGACTGTAGGTTTGTGAACTGA 990 0.4485 MGHRVHFSYFIIPFLCLFSFLVPSAYSQFLDYKFYDRSCPDLPVIVVRNVWEAYWKESRVAATLLRLHFHDCIVNGCDASVLLDDTEDFKGEKSTPVNRMLPLAFEVIDNIKEDVESACPSTVSCVDILTLAAREGVILSGGRYWNVPLGRRDGTTSDPKAVVQIPAPFEPLENITAKFTSKGLDLKDVVALSGAHTIGFAQCFTFKSRLFNFQGTGQPDPTLDASVLSDLRKTCPNKDSADTNIAPLDSVSTNRFDNAYYGNLVRNTGLLKSDQALMTDPDTAALVNRYRTNPRYFFRDFVTSMVKLSYVGILTGEKGQIRKDCRFVN* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0522 329 Pfam Peroxidase 50 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi3g0522 329 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Vvi3g0522 329 CDD secretory_peroxidase 30 328 IPR033905 GO:0004601|GO:0042744
Vvi3g0522 329 Gene3D - 33 329 - -
Vvi3g0522 329 SUPERFAMILY Heme-dependent peroxidases 30 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi3g0522 329 FunFam Peroxidase 33 178 - -
Vvi3g0522 329 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi3g0522 329 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi3g0522 329 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi3g0522 329 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi3g0522 329 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi3g0522 329 PANTHER PEROXIDASE 72-RELATED 28 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi3g0522 329 ProSiteProfiles Plant heme peroxidase family profile. 29 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi3g0522 329 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi3g0522 329 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi3g0522 329 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi3g0522 329 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi3g0522 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi3g0522 329 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi3g0522 329 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi3g0522 329 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi3g0522 329 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi3g0522 329 Gene3D Peroxidase, domain 2 166 308 - -
Vvi3g0522 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Vvi3g0522 329 FunFam Peroxidase 166 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0522 Vvi-Chr3 4477616 4479745 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0522 1 327 Peroxidase AT1G49570 56.160 2.30e-137 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0522 K00430 - vvi:100264023 672.93